Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00626 ATGGAGAAAGGAAGAAAAGCATGTGGTTCTAAGAGAAAGCCCCAAAGTTTCAAGGATGAGGATCACTATATAAGTTCAATACCAAAAAATCAAGTTCTTGAGATTCTGGAATTATATAGGCGTATATACGAAGAGTATTTGGCAGTGTTGAGGTGCAACTTCTCATTGTTGGGCCAAAATTTTGCTAAAATGTTTGACATAAACTTTGAAAATGAAAAGGGAGAGAAAGGAATGGTCTGGCAGAATTCATGGGCCTATAATACTCGAACTGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGTGTTTGTTTGATTCAGAGGGAGTTTGCTTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGATTGATGCAGAGCTTCAAATCCAGAGAGTTAGCATGATAATTAACGAAACACTTCGGCTCTATCCTCCAGCGGTAATGCTAATGAGGCAAGCCTCTAAAGATGTGATGTTTGGAAGCATTAATGTTCCTGCTAAGACTCAACTCTTCTTGGCATTGACTGTTGTTCATCATGACAGAGAAATCTGGGGAGAAGATTGCCATAACTTCAATCCAATGAGATTTAGTGAGCCTAAAAAATATTTGGCTGCATTATTTTCCTTCGGATTAGGCCCTCAAACCTGTGTTGGTCAAAATTTATCATTGGTTGAGGCAAAGATTGCTCTTGCTGTGATCATTCAAAGTTATAGTTTTGTGCTATCTCCAAACTATATGCATGCTCCTATACTATTTGTGACTTTGCAGCCTCAATATGACAAAAGAATGAAGGAATATGAGGCTTTACATGTAAGAAGGCAGGGAAAAGCATATCGAAGTGCTTCTGCACGAGTTTGGGCCGCTTATTGGGCCTCCTGGGAGGGCGGTGGCCCAAGATGGCGAAGAAATCTTCTTCGATTTCTTTCTTTGAGAGCTACAAAGAGAAGTTCTTCACCCTTTCCATCTCGTCGATCTTCAACACTTTCGCCCTTCTCTTCCTCAGATTCCATGGCCCCACAGCCTTAG 1071 0.409 MEKGRKACGSKRKPQSFKDEDHYISSIPKNQVLEILELYRRIYEEYLAVLRCNFSLLGQNFAKMFDINFENEKGEKGMVWQNSWAYNTRTDDTAFEKQSALFALAVSDIVLINMCVCLIQREFAFAKKDFNLAKHPEIDAELQIQRVSMIINETLRLYPPAVMLMRQASKDVMFGSINVPAKTQLFLALTVVHHDREIWGEDCHNFNPMRFSEPKKYLAALFSFGLGPQTCVGQNLSLVEAKIALAVIIQSYSFVLSPNYMHAPILFVTLQPQYDKRMKEYEALHVRRQGKAYRSASARVWAAYWASWEGGGPRWRRNLLRFLSLRATKRSSSPFPSRRSSTLSPFSSSDSMAPQP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00626 356 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 89 120 - -
Gma19g00626 356 Gene3D Bira Bifunctional Protein; Domain 2 20 99 IPR045864 -
Gma19g00626 356 PRINTS B-class P450 signature 166 193 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS B-class P450 signature 149 160 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS B-class P450 signature 231 242 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS B-class P450 signature 222 231 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 Pfam Cytochrome P450 135 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 SUPERFAMILY Cytochrome P450 131 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 Gene3D Cytochrome P450 128 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 133 277 - -
Gma19g00626 356 PRINTS P450 superfamily signature 231 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS P450 superfamily signature 134 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS P450 superfamily signature 222 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 PRINTS P450 superfamily signature 149 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00626 356 MobiDBLite consensus disorder prediction 330 356 - -
Gma19g00626 356 PANTHER CYTOCHROME P450 FAMILY MEMBER 133 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00626 Gma-Chr19 17979243 17989755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00626 136 273 Cytochrome P450 AT1G75130 57.246 6.21e-51 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00626 - - gmx:100775195 238.81