Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00618 ATGGATTGCAGAATAGAGAGTGCCGAAACTCACAGGAATAAGTGTGCAGCATGCTTCCGACAGTTCAACAAACTGGAGCATCTTGTGGAGCACATGAGGATCTCATACCATTCGGTTCATGAACCAACCTGTGGCATTTGCAGGAAACACTGCAGGTCTTTTGAGTCTCTCAGGGAACATCTTATAGGTCCATTGCCAAAACAGGAATGCAGAGATATATTTTCCTATAGAGGGTGCAAGTTTTGTTTGAAAGTCTTTGAAAGCCCTAACTCTCGCAGGATCCACCAAGAAAAATGCCAACTCTCTGGAACAAATGCTGGAATAATTGGTCGCTTTTCAAACTTGGGACTTCGTGATAATTTGGCTATTGGTGGTGGAGCAAGAGGACCACAAGTAGTTGCTCTAGCATGTAAAATGGTTGGAGGCGGCAGTGATGGCTCACTTGATCTCTGTGCAAGAGTTTGCTTAATCGATGAACATGAGAACATAATATTCCATTCTTATGTGAAGCCACCAATTCCTGTCGCAAACTACAGGTATGAGACAACAGGCATCACACCAGAATATCTTAGGGATGCAATGCCAATGAGACATGTTCAGAGGAGGATTCATGACTTCCTTTGCAATGGTGAACCTATGTGGACAATTCGAGCAAGAGGTGGAAGAGCCAGGATTCTTGTGGGTCATGGTTTGGATCATGACCTTGAAAGTTTGCAAATAGAATATCGAGCTGAAAAAATAAGGGACACTGCAAAATACCCTCCACTGATGAAAACAAGCAAGCTGAGCAACTCACTCAAGTATGACATTCAAACTGGGATTCAGGATCCTTATGAGGATTGTATTGCAACGATGAGGCTCTACATGAGAATGAGATCTCAAGCACATAGAGTACAGGAATACCCTTTGGCGTCTGACCCTCAGAACAGGAATAATTTTGCTTCATGGAGGCAAAGTGAGATTGAAAGAATGAGTCCTGAACAAATGCTAGAAATTTCAAGGTCTGACTACTACTGCTGGTGCTTGGATTCCTTGTATTGA 1041 0.4304 MDCRIESAETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFSYRGCKFCLKVFESPNSRRIHQEKCQLSGTNAGIIGRFSNLGLRDNLAIGGGARGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVKPPIPVANYRYETTGITPEYLRDAMPMRHVQRRIHDFLCNGEPMWTIRARGGRARILVGHGLDHDLESLQIEYRAEKIRDTAKYPPLMKTSKLSNSLKYDIQTGIQDPYEDCIATMRLYMRMRSQAHRVQEYPLASDPQNRNNFASWRQSEIERMSPEQMLEISRSDYYCWCLDSLY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00618 346 CDD REX4_like 133 288 IPR037431 GO:0006364|GO:0008408
Gma19g00618 346 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Gma19g00618 346 Pfam Exonuclease 151 252 IPR013520 -
Gma19g00618 346 Gene3D - 129 308 IPR036397 GO:0003676
Gma19g00618 346 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 344 - -
Gma19g00618 346 SMART exoiiiendus 131 297 IPR013520 -
Gma19g00618 346 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Gma19g00618 346 PANTHER OS02G0709000 PROTEIN 6 344 - -
Gma19g00618 346 SUPERFAMILY Ribonuclease H-like 145 292 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00618 Gma-Chr19 17703832 17705905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00618 1 345 C2H2 Transcription Factor Family AT3G27970 72.191 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00618 - - gmx:100813973 721.079