Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00593 ATGAACTCCAAAAGCTTCTCCTCATCAAATCCAAGCCACAACAAAAATAATTACCCATCATGGGTTCTCTTCACCACACTCTTACTCTCATCTCTATCCCTCACAGTTTCTAATCCAAGGATTACCGAGGCAGGGCTCTACTGTGGCACTAGCAAGGCCCCTCTGAAGGCCAACTACATCCCCAGCTTCATCAAGGAGATGGAGAGCCTCTCGCAGCTCGTCACCAGCAACAACTGGGGCACACACTCTGTAAAAATATCAGGCTCAGGCTCATCCATTCCCATTTACGGCTTCGCGCAATGCTTCCGCGACCTCTCCCACACCGACTGCCTCCTCTGCTATGCCGCGAGCCGCACCAGGCTCCCCCGCTGCCTCCCTTCCGTCTCGGCCCGCATCTACCTCGACGGCTGCTTCCTCCGCTATGACAACTACAGCTTCTATTCGGAAGGCACCGATCCTTCGAGGGACGCGGTGAACTGCACCGGGGTGGCTGCTGGTGATGAGGCTGAGAGGGTGGAGCTTCAGGAGAGAGTTGGAAGAGTGGTGGATAATGTGGTTAACATTGCTGAGCGTGATGGTAATGGTTTTGGTGTGGGAGAGGTTGAGGGGGTTTATGCTTTGGCTCAGTGCTGGAACACTCTTGGGAGTGGCGGGTGCAGAGAGTGCTTGAGGAAAGCTGGGAGGGAGGTGAAGGGGTGCTTGCCCAAGAAGGAAGGGAGGGCCTTGAATGCTGGCTGTTATTTGAGGTATTCCACGCAGAAGTTTTATAATGAGGATGGTGATGCAGGTGGTGGAAATGGGTTCTTAAGAAGAAGAGGAGTCATAGTAGCAGAAGTGTTAGCAGCAGCTGCAGTTATAATGCTCGCTCTCTCTGCCTCCTATGCAGCTTTCACAAAATTTTCAAAGATAAAAAAAGAAAACAATAATCTCGGTCAGATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAGTACGAAACTCTTGAGAAGGCCACAGATTATTTCAACTCCTCGAGAAAAGTAGGCCAAGGTGGAGCTGGTTCAGTTTTCAAAGGTATTCTCCCAAATGGGAAAGTTGTAGCTGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTGAATTTGATCAGCGGAATTGAACACAAGAATCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTGTATGAGTACTTACCCAAAAAGAGTTTAGACCAATTTATCTTTGAAAAAAACAGAACTCAGATTCTAAACTGGAAGCAGCGGTTTAACATCATTCTAGGAACGGCAGAAGGGCTTGCATATCTTCATGAAGGCACTAAAATAAGAATCATCCATAGAGACATCAAAAGCAGCAATGTTCTTCTGGACGAGAATCTCACTCCCAAGATTGCAGATTTCGGCCTTGCCCGGTGTTTTGGTGGTGATAAGTCACATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTCGAGGACAACTTACAGATAAAGCTGATGTCTATAGTTATGGAGTACTTGTTCTGGAGATTGTGAGTGGCAGGAGGAATAATGTCTTCAGAGAGGACTCTGGCTCGCTTCTACAAACAGCTTGGAAACTATACCGATCAAACACATTAACCGAAGCTGTTGATCCTTCCTTGGGAGATGATTTTCCTCCATCGGAAGCATCAAGGGTGCTTCAAATTGGATTGCTTTGCACACAAGCTTCAGCTTCCCTAAGACCATCTATGTCCCAAGTTGTTTACATGCTAAGTAATACAAATTTAGATGTTCCCACACCAAATCAACCCCCATTTTTGAACACTGGAATGCTTGACTCAGATAGTTCCATTAAGTCTTATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTGTCCTACAGCTACTCAGAGTCCTCACGAAATTCAGATGGGCCATCAAGAAGTGAAGAATCAATTATCCAAGTTTGA 2022 0.4619 MNSKSFSSSNPSHNKNNYPSWVLFTTLLLSSLSLTVSNPRITEAGLYCGTSKAPLKANYIPSFIKEMESLSQLVTSNNWGTHSVKISGSGSSIPIYGFAQCFRDLSHTDCLLCYAASRTRLPRCLPSVSARIYLDGCFLRYDNYSFYSEGTDPSRDAVNCTGVAAGDEAERVELQERVGRVVDNVVNIAERDGNGFGVGEVEGVYALAQCWNTLGSGGCRECLRKAGREVKGCLPKKEGRALNAGCYLRYSTQKFYNEDGDAGGGNGFLRRRGVIVAEVLAAAAVIMLALSASYAAFTKFSKIKKENNNLGQISSSISKSSLNYKYETLEKATDYFNSSRKVGQGGAGSVFKGILPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDENLTPKIADFGLARCFGGDKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSYGVLVLEIVSGRRNNVFREDSGSLLQTAWKLYRSNTLTEAVDPSLGDDFPPSEASRVLQIGLLCTQASASLRPSMSQVVYMLSNTNLDVPTPNQPPFLNTGMLDSDSSIKSYSTNSFISNALKKIGVSYSYSESSRNSDGPSRSEESIIQV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00593 673 Gene3D - 44 146 IPR038408 -
Gma19g00593 673 Gene3D - 162 255 IPR038408 -
Gma19g00593 673 Gene3D Phosphorylase Kinase; domain 1 295 411 - -
Gma19g00593 673 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 31 660 - -
Gma19g00593 673 Pfam Protein kinase domain 337 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00593 673 Pfam Salt stress response/antifungal 196 252 IPR002902 -
Gma19g00593 673 Pfam Salt stress response/antifungal 66 144 IPR002902 -
Gma19g00593 673 MobiDBLite consensus disorder prediction 653 673 - -
Gma19g00593 673 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 660 - -
Gma19g00593 673 CDD STKc_IRAK 342 604 - -
Gma19g00593 673 SMART serkin_6 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00593 673 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Gma19g00593 673 Gene3D Transferase(Phosphotransferase) domain 1 412 613 - -
Gma19g00593 673 SUPERFAMILY Protein kinase-like (PK-like) 319 634 IPR011009 -
Gma19g00593 673 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00593 673 ProSiteProfiles Gnk2-homologous domain profile. 156 255 IPR002902 -
Gma19g00593 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00593 Gma-Chr19 14979551 14983489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00593 22 501 Receptor kinase-like Gene Family AT5G40380 57.796 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma19g00593 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00593 - - gmx:100790404 1266.91