Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00589 ATGGACAAGAAGCTTGGCAACACGTCTCATGATCCTGAAGTGAGAAAGGGGCCATGGACAATGGAAGAAGACTTAATCTTGATCACCTATATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCCGTCCTGATGTTAGAAGAGGGAATATTACACCCGAGGAACAGCTTTTGATCATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCCAAAATTGCCAAGCATCTACCCGGAAGGACTGATAATGAGATTAAGAACTACTGGAGGACAAGGATCCAGAAGCACCTCAAGCAAGCTTCCAGCAGCTTCCAGCAACAGAGTAGTAATTCTGAGATAATTTATCATCCCCAAGCTTGCACTAGCCAAGTGTCCACCATGGCGCAGCCCATAGAAACCTATTCTCCACCCAGTTATCAAGGAATGTTAGATCCATTTTCAATTCAGTTCCCAACAAATCCTCATCATTCTAGTTGTTGTACCAATGACGACGACAACAACAACTATTGGAGCATGGAGGATATCTGGTCAATGCAATTAGCCAATTACTGA 615 0.4569 MDKKLGNTSHDPEVRKGPWTMEEDLILITYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHLKQASSSFQQQSSNSEIIYHPQACTSQVSTMAQPIETYSPPSYQGMLDPFSIQFPTNPHHSSCCTNDDDNNNYWSMEDIWSMQLANY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00589 204 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 202 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma19g00589 204 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Gma19g00589 204 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 202 - -
Gma19g00589 204 CDD SANT 73 112 IPR001005 -
Gma19g00589 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Gma19g00589 204 Gene3D - 16 68 - -
Gma19g00589 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Gma19g00589 204 Gene3D - 73 136 - -
Gma19g00589 204 CDD SANT 18 63 IPR001005 -
Gma19g00589 204 SMART sant 15 65 IPR001005 -
Gma19g00589 204 SMART sant 68 116 IPR001005 -
Gma19g00589 204 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Gma19g00589 204 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Gma19g00589 204 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Gma19g00589 204 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00589 Gma-Chr19 14287700 14293644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00589 14 203 MYB Transcription Factor Family AT3G01530 57.368 2.37e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma19g00589 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00589 K09422 - gmx:778047 430.254