Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00567 ATGAAGCTTTCAACATCAGGGTTGGGGCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCATGCATGCACAGGCCCCTTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAAGGTCATAATGAGCAGGTAGATGTTGAAACAGATGAAGTATATGCTCAAATGACATTGCAACCATTGACTCTGTGGAATGGAATGGGGAACCAAGAACTCCTTGATTGCTTCTGTGACTATGCTGCATTGAAGGCTCGACACTCGTATGGTCCACAAGGGCACCGAGGGATGAGTGCCTTAATTTTTGAGGAATCCACGATAGAGCAAGGAAGAGATAGGGAGGCTTGGGATTGCTATCAGAATCCATTTCTCCCAGGTGGGAAGCGCCAACTTTATGGTTACTTGGCTTCTAAAGAAGATTTGGATATTTTCAACAAGCACTCTAGAGGAAAGACAAAATTGAAGTTTGAAATGAGATCATATCAAGAGATGGTTGAGAGCAAGATAAAACATATTAATGATGATAGTCAGAATCTTGACTATTATAAGAGCATGGTAGCCAAAGAACAAATCAAATCACAAGTAGGTACAGACTCTTTATTGAGAATAAGTGAGAAGTTAAGCTTGACAACCGAAGAAAACCGTGTTGACCAACAAAACAAGGAGATGGATGCACTAGAAAAAAATTTCCAGAGCCAAATCCTAGACATTCAACAAGCCATAGCTGCAAAGGAAGATAAGTTTGTGAAATTACAGCAGGCAATGCAAGAAAAAGTAAAAGAGTCCTGCGGAGAATCTTCTGAGAAAGAGGACAAGTACATCTAA 849 0.4205 MKLSTSGLGQQGHEGGEKKCLNSELWHACTGPLVSLPTAGTRVVYFPQGHNEQVDVETDEVYAQMTLQPLTLWNGMGNQELLDCFCDYAALKARHSYGPQGHRGMSALIFEESTIEQGRDREAWDCYQNPFLPGGKRQLYGYLASKEDLDIFNKHSRGKTKLKFEMRSYQEMVESKIKHINDDSQNLDYYKSMVAKEQIKSQVGTDSLLRISEKLSLTTEENRVDQQNKEMDALEKNFQSQILDIQQAIAAKEDKFVKLQQAMQEKVKESCGESSEKEDKYI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00567 282 Coils Coil 249 269 - -
Gma19g00567 282 Gene3D XS domain 65 205 IPR038588 -
Gma19g00567 282 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 73 279 - -
Gma19g00567 282 Coils Coil 217 244 - -
Gma19g00567 282 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 73 279 IPR044287 GO:0031047|GO:0051607
Gma19g00567 282 Pfam XS domain 72 149 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00567 Gma-Chr19 12898304 12904469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00567 1 70 B3 DNA Binding Superfamily AT1G30330 52.885 7.95e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00567 - - gmx:100796906 401.749