Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00555 ATGAGTCAGTTAGATTCAAAAGGAGTTGTAGGGACCACTCATTTATTGAAAGTTGACTCTCCAAACACTGATGGAATAGATCCAGGCGACTCATGTTTAAGAAAGAATTTGACACAAGCTATGTGGGATTCAATTCTGGATCAGAGCTTCTCTCTCGTCAGAATTTATCCAAATTGCTATTCCAGAGTTATAAGTGTTAATGGCGATGAACATATTATAATATTTGCGCAGAGGGACATTAAACAGTGGGAAGAGCTTACATATGATTACAG 272 0.375 MSQLDSKGVVGTTHLLKVDSPNTDGIDPGDSCLRKNLTQAMWDSILDQSFSLVRIYPNCYSRVISVNGDEHIIIFAQRDIKQWEELTYDY 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00555 90 ProSiteProfiles SET domain profile. 1 90 IPR001214 GO:0005515
Gma19g00555 90 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 57 90 - -
Gma19g00555 90 SUPERFAMILY SET domain 57 90 IPR046341 -
Gma19g00555 90 Pfam SET domain 56 90 IPR001214 GO:0005515
Gma19g00555 90 Gene3D SET domain 31 90 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00555 Gma-Chr19 12240163 12278532 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma19g00555 SET 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00555 - - pvy:116129729 75.0997