Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00547 ATGCTGTTGTTGAATGGCTATAACTCTGCTACTTTGGACTTAGACCAATGTAGAGCACAGGTACAAAAGACAGAGATACTCAGGCAGGCAATTTTAGCTTGGAGCAGATCAAAGTTTAATAAGATTGAGGAAGGCGGTTTTGGTCCTGTATACAAGGGTCAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAACTATCATCAAAATCATGGCAGGGAAATCGTGAATTTATAAATGAAATAGGCTTCATATCTTGTGCGCAACACCCTAACCTTGTAAAGCTTCATGGATACTATGCTGAAGGAGAACAACTCTTACTGCCTCCACTCGTGAGACATGCTCGAACTCCTCGACACATGATGTATGGCGAGACAAGCATGTGGCAGTGGCGCTTCAGGAGGCAGAGTGTGAAGTTGCGCCTCTCCTCGAGGGAGTCCTGCACAGTCTCCACATGGTGCGTCCATGTGATACGGTGGCCACGAAGGCGTTGTGGACAATGTGGTTCAACACAACAGAGAAGGAGACGCGATTCGACAACAGCGAACGGGGGAGAGTTAATCGGCGGCACGCGGCGACAGGGATGCTCATCATGTTCTTCAATTCATTTATTTCTGAAGTTTGGGGTGAATCTTGTGACGAGATTTTTTCTTTATGGACCTCCTGGTTGTGGTAAAACACTGATTGCCAAAGCTATTGCCAATGAGGCACGGGCTGATTTTATTCATATTAAGATTAAGTTGGGAGAACCTGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCCAAAACTCCTGAGGAACTTGAAGCTATACGTAAAGATGTCGTCTTGAAATACACTGAAGGCCTATGTTGGGTGATGCACATGGAAATTTGA 879 0.4494 MLLLNGYNSATLDLDQCRAQVQKTEILRQAILAWSRSKFNKIEEGGFGPVYKGQLLDGTFIAVKQLSSKSWQGNREFINEIGFISCAQHPNLVKLHGYYAEGEQLLLPPLVRHARTPRHMMYGETSMWQWRFRRQSVKLRLSSRESCTVSTWCVHVIRWPRRRCGQCGSTQQRRRRDSTTANGGELIGGTRRQGCSSCSSIHLFLKFGVNLVTRFFLYGPPGCGKTLIAKAIANEARADFIHIKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHMEI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00547 292 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Gma19g00547 292 Pfam Protein tyrosine and serine/threonine kinase 40 106 IPR001245 GO:0004672|GO:0006468
Gma19g00547 292 SUPERFAMILY Protein kinase-like (PK-like) 37 107 IPR011009 -
Gma19g00547 292 CDD AAA 215 249 - -
Gma19g00547 292 Gene3D - 193 274 IPR027417 -
Gma19g00547 292 PANTHER KINASE-RELATED 40 107 - -
Gma19g00547 292 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 107 - -
Gma19g00547 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 245 IPR027417 -
Gma19g00547 292 Pfam Xrn1 helical domain 232 289 IPR041412 -
Gma19g00547 292 Pfam ATPase family associated with various cellular activities (AAA) 216 245 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00547 Gma-Chr19 10619297 10629309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00547 27 107 Receptor kinase-like Gene Family AT1G53420 65.854 2.38e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma19g00547 PK_Tyr_Ser-Thr 8.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00547 - - gmx:106796085 124.79