Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00546 ATGACAATGATGATGAGATCAAACCAAAACAACAATAGGATTTTCAATATTGGCTCACAGTTGCCTTTAATTGAGATAAAGGACTTGGGTTCGGGCATTGAAGTGATGTTGATAAGTGGGTTAAATAAGAACTTGATGCTATATGAAGTAATTAGTGTCCTCGAGGAAGACGGTGCTGAAGTTGTCACTGCCAACTTCTCTACAGTTGCTGATAAGATTTTTTACACGGGTCATGCTCAGGCTGCAAGTAAGCCTAAGAGGAGAATTGGGATTGAAGTTGAGGAGAGTGTGAGGTACTGTTCAATATATCTCAAGAGTTACATCCCCTTGCTCTACTTGCATTGGCTATGGGAATAG 357 0.4034 MTMMMRSNQNNNRIFNIGSQLPLIEIKDLGSGIEVMLISGLNKNLMLYEVISVLEEDGAEVVTANFSTVADKIFYTGHAQAASKPKRRIGIEVEESVRYCSIYLKSYIPLLYLHWLWE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00546 118 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 20 95 IPR015660 GO:0003700|GO:0006357
Gma19g00546 118 PANTHER OS01G0108400 PROTEIN 20 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00546 Gma-Chr19 10610777 10612052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00546 20 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 41.935 8.15e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00546 - - gmx:100811485 145.591