Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00524 atggctaagcaatcatcctcatcttcctttagttacagattcagcaacgatgtgttcctcagcttccgaggggaagatactcgtcgcggttttactggcaatctctataaagctctctctgacaggggaattcacaccttcatggatgacaagaagatccctagaggagaccaaatcacctcaggacttgagaaggcaattgaagagtccagaatattcatcatcgtgctctctgaaaactatgcatcgtcctccttctgcttaaacgaacttgattacatccttaagtttattaaggggaagggcatattgattttgccagttttttataaggttgacccttctgatgtgagaaaccacactggtagttttggaaaggcgttgactaatcatgaaaagaagttcaaaagtactaatgacatggagaagctggaaacatggaagatggctctgaacaaagtggctaatttatctggttaccatcatttcaaacatggggaagaatacgaatatgaatttattcagaggattgttgagttggtctctaagaagattaatcgtgctcctttacatgttgcggattatccagttggactagagtcacgaatacaagaagtaaaagcgcttctggatgttggatctgatgatgttgtccacatgctgggtatacatgggctcggtggagtaggtaaaacgacacttgctgctgcagtttataattccattgctgaccattttgaagctttgtgtttccttcaaaacgtgagagaaacttcaaagaaacatgggttacaacatctacaaagaaaccttctttctgaaatggccggagaggataagttaataggtgtcaaacaaggaatttccataatagagcataggctccggcaaaagaaggttcttttgattctcgatgatgttgacaaaagggaacagctacaggcgcttgctggaagacctgatttgtttggtcctggcagtagagtcatcatcacgactcgggacaaacaattgctagcatgtcacggtgttgaaagaacatatgaggtgaatgaattgaatgaggaatatgctcttgagttacttaattggaaagctttcaagttggaaaaagttgatccattttacaaggatgttttgaatcgagcagcaacttatgcttcaggccttccattggctttagaagtaataggttccaacttatccggaaaaaatatagaacaatggatatctgctttagatcgatacaaaagaatccctaataaagagatccaagagatacttaaagtgagttatgatgctttggaagaggatgagcaaagtatttttcttgacattgcttgttgcttcaaaaaatatgatttggcagaggtccaagatatacttcatgctcatcatggccattgcatgaaacatcatattggagtgttggttgaaaaatctctcataaagattagtttggatggctatgttacactacatgacttgatagaggacatgggtaaagaaattgtccggaaagaatctccccaagagcctgggaaacgtagtaggttatggctacctacagatatagttcaagttttagaagagaacaagggaactagtcatattggaatcatatgcatgAATTTCTACTCCTCATTTGAAGAAGTAGAAATACAGTGGGATGGAGATGCCTTCAAAAAGATGAAAAATCTCAAGACACTTATTATCAGAAGTGGTCATTTCTCCAAAGGTCCCAAACATTTTCCTAAGAGTTTAAGAGTATTGGAATGGTGGAGATATCCTTCACATTATTTTCCATATGATTTTCAAATGGAGAAGCTTGCTATATTCAACTTACCCGACTGTGGGTTTACTTCACGTGAGTTGGCTGCCATGTTAAAAAAGAAGTTTGTGAATCTGACAAGTCTAAATTTTGACTCATGTCAACATTTAACACTGATACCTGATGTATCTTGTGTCCCACATTTGCAAAAATTGTCATTTAAAGATTGTGATAATTTATATGCCATTCACCCGTCAGTAGGCTTCTTGGAAAAACTGAGAATCTTGGACGCAGAAGGTTGCTCCAGGCTTAAGAATTTCCCCCCCATCAAATTGACCTCTCTTGAGCAACTCAAACTTGGGTTTTGTCACAGCCTTGAAAATTTTCCAGAAATATTAGGAAAGATGGAAAACATAACAGAACTTGACTTGGAACAAACTCCTGTAAAAAAATTCCCTCTTTCATTTCAAAATCTTACTCGGCTTGAAACTGTACTTCTGTGTTTCCCTCGAAACCAGGCAAACGGTTGTACTGGCATTTTCCTTTCGAACATTTGCCCGATGCGAGAAAGCCCGGAACTGATCAATGTCATAGGTGTGGGATGGGAAGGGTGTCTATTCCGTAAAGAGGATGAGGGTGCAGAGAATGTGAGCTTAACCACATCTTCAAACGTTCAATTTCTTGATCTCAGAAACTGCAACCTGTCAGATGATTTTTTTCCGATAGCTCTCCCATGCTTTGCTAATGTAATGGAGTTAAACCTATCAGGGAATAATTTCACAGTTATTCCCGAATGCATCAAAGAATGCCGCTTTTTAACAACACTTTACTTGAATTATTGTGAGCGACTTCGAGAAATTAGAGGGATTCCTCCAAACTTGAAATATTTCTATGCAGAAGAATGCCTATCATTGACTTCCTCATGTAGAAGCATGTTACTCAGTCAGGAACTGCATGAGGCTGGAAGAACCTTCTTCTATTTGCCAGGAGCCAAGATTCCAGAGTGGTTTGATTTCCAAACATCGGAATTTCCAATTTCTTTCTGGTTTCGTAACAAATTCCCAGCCATTGCTATTTGTCATATTATCAAACGGGTGGCTGAGTTTTCCTCATCGAGAGGTTGGACATTCAGACCCAACATTAGAACCAAGGTGATCATCAATGGCAATGCAAATTTGTTTAACTCTGTGGTGTTGGGAAGTGATTGTACATGTCTTTTTGATCTGCGGGGTGAAAGAGTAACAGATAATTTAGATGAAGCACTTTTAGAAAATGAATGGAACCATGCAGAAGTTACATGTCCAGGTTTTACTTTTACTTTTGCCCCAACCTTTATAAAAACTGGACTACATGTATTGAAACAGGAAAGTAACATGGAGGATATTCGATTCTCTGATCCTTGTAGAAAAACAAAATTGGATAATGATTTCAATAGTTCAAAACCAAAATATCAAAGATGGGTGGGCAATGATGTTGCCAAGACACAAGTTGTGCAGCAGCAACAACTTATGGGCTCTTTTTTGTCACGCATGTGGCACTGGGCActagtgtttctcatttctttcctagtgtttctcatttcttGCCGCCGCAACAATCAATGA 3375 0.1973 MAKQSSSSSFSYRFSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQNLTRLETVLLCFPRNQANGCTGIFLSNICPMRESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFPIALPCFANVMELNLSGNNFTVIPECIKECRFLTTLYLNYCERLREIRGIPPNLKYFYAEECLSLTSSCRSMLLSQELHEAGRTFFYLPGAKIPEWFDFQTSEFPISFWFRNKFPAIAICHIIKRVAEFSSSRGWTFRPNIRTKVIINGNANLFNSVVLGSDCTCLFDLRGERVTDNLDEALLENEWNHAEVTCPGFTFTFAPTFIKTGLHVLKQESNMEDIRFSDPCRKTKLDNDFNSSKPKYQRWVGNDVAKTQVVQQQQLMGSFLSRMWHWALVFLISFLVFLISCRRNNQ 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00524 1124 CDD AAA 197 335 - -
Gma19g00524 1124 Pfam NB-ARC domain 201 434 IPR002182 GO:0043531
Gma19g00524 1124 Gene3D - 352 436 IPR042197 -
Gma19g00524 1124 SMART till_3 15 157 IPR000157 GO:0007165
Gma19g00524 1124 Gene3D - 14 182 IPR035897 -
Gma19g00524 1124 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
Gma19g00524 1124 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
Gma19g00524 1124 Gene3D - 183 345 IPR027417 -
Gma19g00524 1124 SUPERFAMILY L domain-like 554 901 - -
Gma19g00524 1124 SUPERFAMILY "Winged helix" DNA-binding domain 422 530 IPR036390 -
Gma19g00524 1124 PRINTS Disease resistance protein signature 294 308 - -
Gma19g00524 1124 PRINTS Disease resistance protein signature 220 235 - -
Gma19g00524 1124 PRINTS Disease resistance protein signature 387 401 - -
Gma19g00524 1124 PRINTS Disease resistance protein signature 678 694 - -
Gma19g00524 1124 Gene3D Ribonuclease Inhibitor 536 779 IPR032675 -
Gma19g00524 1124 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1013 IPR044974 GO:0006952
Gma19g00524 1124 Pfam TIR domain 17 187 IPR000157 GO:0007165
Gma19g00524 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Gma19g00524 1124 Gene3D Ribonuclease Inhibitor 800 911 IPR032675 -
Gma19g00524 1124 PANTHER NB-ARC DOMAIN PROTEIN 19 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00524 Gma-Chr19 9326907 9331376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00524 10 771 WRKY Transcription Factor Family AT4G12020 28.736 7.08e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00524 - - gmx:548035 2212.19