Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00523 ATGCAATCATCCtcatcttcctttagttacagattcagcaacgatgtgttcctcagcttccgaggggaagatactcgtcacagttttaccggcaatctctataaagctctctctgacagaggaattcacaccttcatcgatgacaagaagctccctagaggagaccaaatcagctcagcacttgagaaggcaattgaagagtccagaatattcatcatcgtgctctctgaaaactatgcatcgtcctccttctgcttaaatgaacttggttacatccttaagtttattaaggggaagggcctattggttttgcctgttttttataaggttgatccttctgatgtgagaaaccatgcaggtagttttggagagtcattggcTCATCATGAAAAGAAGTTCAACGCTGATAAGGAGACTTTCAAGTGTAACCTGGTGAAGCTGGAGACATGGAAGATGGCTCTTCACCAAGTGGCTAACTTGTCTGGTTACCATTTCAAACATGGGGAAGAATACGAATATAAGTTTATTCAGAGGATTGTTGAGTTGGTCTCTAAGAAGATTAATCGTGTTCCTTTACATGTTGCGGATTATCCAGTTGGACTAGAGTCACGAATGCAAGAAGTAAAAGCACTTCTGGATGTTGGATCTGATGATGTTGTCCACATGCtggggatacatgggctgggtggagtaggtaaaacgacacttgctgctgcagtttataattccattgctgaccattttgaagctttgtgtttccttgaaaacgtgagagaaacttcaaaaaaacatgggttacaacatctccaaagcaaccttctttctgaaacagttggagagcataagttaataggtgtgaaacaaggaatttccataatacagcataggcttcagcaacagaagattcttttgattctagatgatgttgacaaaagggagcagctacaggcgcttgctggaagacctgatttgtttggtcttggcagtagagtcatcatcacgactcgggacaaacaattgctagcatgtcacggtgttgaacgaacatatgaggtgaatgaattgaatgaggaacatgctcttgaattacttagttggaaagctttcaagttggaaaaagttgatccattttacaaggatgttctgaatcgagcagcaacttatgcttcgggccttccattagctttagaagtaataggttccaacttatatggaagaaatatagaacaatggatatctgctttagatcgatacaaaagaatccctaataaagagatccaagagatacttaaagtgagttatgatgctttggaagaagatgagcaaagtgtttttcttgacattgcttgttgcttcaaaaaatatggtttggtagaggttgaagatatacttcatgctcatcatgggcattgcaagaaacatcatattggagtgttggttgaaaaatctctcataaagattagttttgatggtaacgtaacactacatgacttgatagaggacatgggtaaagaaattgtcaggcaagaatcagtcaaagaacctgggaaacgtagcagattatgGTTTCCAAAGGATATAGTTCAAGTTTTAGAAGAAAATAAGGGAACTAGTCAGATTGAAATCATTTGTATGGATTTCCCCATATTTCAAGAAATACAAATAGAATGGGATGGGTATGCCTTCAAGAAGATGAAAAAACTCAAAACACTTATTATCAGAAATGGTCATTTCTCCAAAGGTCCCAAACATCTTCCTAATACATTGAGAGTTTTGGAATGGAAGAGATATCCTACACAAAATTTTCCATATGATTTTTATCCGAAGAAACTTGCTATATGCAAGTTGCCTTACAGCGGGTTTACATCACATGAGTTGGCTGTCTTATTAAAAAAGAAATTTGTAAATTTGACAAGTTTAAATTTTGACTACTGTCAATATTTAACACACATACCAGATGTATTTTGTCTCCCACATTTGGAAAATTTGTCATTTCAATGGTGTCAAAATTTATCTGCAATTCACTATTCAGTTGGGTTCTTGGAAAAACTTAAAATCTTAGACGGAGAAGGTTGCTCCAGACTTAAGAGTTTTCCCGCCATGAAGTTGACCTCTCTTGAGCAATTCAAACTTCGGTATTGTCACAGTCTTGAGAGTTTTCCAGAAATATTAGGAAGGATGGAAAGTATAAAAGAACTTGATTTGAAAGAAACTCCTGTAAAAAAATTTCCACTTTCATTTGGAAACCTTACCCGGCTTCAAAAATTACAACTGTCTTTGACCGGTGTTAATGGAATTCCCCTTTCCAGCCTTGGCATGATGCCAGATCTGGTCTCTATTATAGGTTGGAGATGGGAATTGAGTCCATTCCCTGAAGATGATGACGGTGCAGAAAAAGTGAGCTCAACCTTGTCTTCAAACATTCAATATCTTCAGTTCAGATGCTGCAACCTAACAGATGATTTTTTTCGAATAGTTCTCCCATGGTTTGCTAATGTGAAGAACTTAGACCTACCAGGAAATTCTTTTACAGTTATTCCCGAATGCATCAAGGAATGCCACTTTTTAACTAGGCTTAATTTGAATTATTGTGAGTTTCTTCGAGAAATTAGAGGGATTCCTCCAAACTTGAAATATTTCTCTGCAATAGAATGTCGATCTTTGACTTCTTCATGTAGAAGCAAGTTACTGAATCAGGATCTGCATGAGGGTGGTAGTACCTTCTTTTATTTGCCAGGAGCCAATATTCCAGAGTGGTTTGAGTTCCAAACATCAGAATTGCCAATATCTTTCTGGTTTCGTAACAAATTGCCGGCCATAGCTATTTGTCTTGTTATGGAACAGGTGTGTGTGTGTGAGTATTCTTCCTCGTCAAAAGGTGACACATTGAGACCCTTGATGATCCCTACTACATTTAGACTCATGTCACCCATCGTGATCATCAATGGCAATGAACATTTTTTGTTTGACAGTTGGGAAATGGTCCGGATGGGAAGTGATTGCACATGTCTTTTTGATCTGCGGGAGACAATACAACAAAATAATTTAAATGAAACACTTTTGGAAAATGAATGGAACCATGCAGTTATTAAATGTCCAGATCTTAATTTTGGCCAAAAATCTATAAAAAACGGAATCCACTTATTGAAACAGGAAAGTAGCATGGAGGATTTTCGATTCACTAATCCTTTTAGAAAAAGAAAATTGGTTGATGATTTCAATAGTTCAGAATCATAA 3237 0.224 MQSSSSSFSYRFSNDVFLSFRGEDTRHSFTGNLYKALSDRGIHTFIDDKKLPRGDQISSALEKAIEESRIFIIVLSENYASSSFCLNELGYILKFIKGKGLLVLPVFYKVDPSDVRNHAGSFGESLAHHEKKFNADKETFKCNLVKLETWKMALHQVANLSGYHFKHGEEYEYKFIQRIVELVSKKINRVPLHVADYPVGLESRMQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLENVRETSKKHGLQHLQSNLLSETVGEHKLIGVKQGISIIQHRLQQQKILLILDDVDKREQLQALAGRPDLFGLGSRVIITTRDKQLLACHGVERTYEVNELNEEHALELLSWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLYGRNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSVFLDIACCFKKYGLVEVEDILHAHHGHCKKHHIGVLVEKSLIKISFDGNVTLHDLIEDMGKEIVRQESVKEPGKRSRLWFPKDIVQVLEENKGTSQIEIICMDFPIFQEIQIEWDGYAFKKMKKLKTLIIRNGHFSKGPKHLPNTLRVLEWKRYPTQNFPYDFYPKKLAICKLPYSGFTSHELAVLLKKKFVNLTSLNFDYCQYLTHIPDVFCLPHLENLSFQWCQNLSAIHYSVGFLEKLKILDGEGCSRLKSFPAMKLTSLEQFKLRYCHSLESFPEILGRMESIKELDLKETPVKKFPLSFGNLTRLQKLQLSLTGVNGIPLSSLGMMPDLVSIIGWRWELSPFPEDDDGAEKVSSTLSSNIQYLQFRCCNLTDDFFRIVLPWFANVKNLDLPGNSFTVIPECIKECHFLTRLNLNYCEFLREIRGIPPNLKYFSAIECRSLTSSCRSKLLNQDLHEGGSTFFYLPGANIPEWFEFQTSELPISFWFRNKLPAIAICLVMEQVCVCEYSSSSKGDTLRPLMIPTTFRLMSPIVIINGNEHFLFDSWEMVRMGSDCTCLFDLRETIQQNNLNETLLENEWNHAVIKCPDLNFGQKSIKNGIHLLKQESSMEDFRFTNPFRKRKLVDDFNSSES 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00523 1078 Gene3D - 12 183 IPR035897 -
Gma19g00523 1078 Pfam TIR domain 15 189 IPR000157 GO:0007165
Gma19g00523 1078 Pfam NB-ARC domain 203 436 IPR002182 GO:0043531
Gma19g00523 1078 Gene3D Ribonuclease Inhibitor 727 901 IPR032675 -
Gma19g00523 1078 SUPERFAMILY "Winged helix" DNA-binding domain 424 532 IPR036390 -
Gma19g00523 1078 SUPERFAMILY L domain-like 557 892 - -
Gma19g00523 1078 ProSiteProfiles TIR domain profile. 12 187 IPR000157 GO:0007165
Gma19g00523 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 950 IPR044974 GO:0006952
Gma19g00523 1078 CDD AAA 199 337 - -
Gma19g00523 1078 Gene3D - 354 438 IPR042197 -
Gma19g00523 1078 PRINTS Disease resistance protein signature 296 310 - -
Gma19g00523 1078 PRINTS Disease resistance protein signature 389 403 - -
Gma19g00523 1078 PRINTS Disease resistance protein signature 679 695 - -
Gma19g00523 1078 PRINTS Disease resistance protein signature 222 237 - -
Gma19g00523 1078 Gene3D - 184 347 IPR027417 -
Gma19g00523 1078 PANTHER NB-ARC DOMAIN PROTEIN 18 950 - -
Gma19g00523 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 448 IPR027417 -
Gma19g00523 1078 Gene3D Ribonuclease Inhibitor 550 726 IPR032675 -
Gma19g00523 1078 SMART till_3 13 160 IPR000157 GO:0007165
Gma19g00523 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00523 Gma-Chr19 9291061 9295620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00523 8 758 WRKY Transcription Factor Family AT4G12020 28.903 2.30e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00523 - - gmx:100784366 2138.23