Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00487 ATGGAGATGAACAATTTTGAAAAAGAGGCTACACCATTGAACCTCAACATTGAGGACAAGCATACGCTCCAATCCAATGGCTTCAAAGCTCCATCATCCCCAAAACAACCCTTTTTTATTGGTACAAATGACATTTACATATTTTATTTTCAATTTCACTATTTTTCTTTTGTTTTTTTACAAAATGAATTTTTTTTAGGTGTTGCTGGTGGAACTGCATCTGGAAAAACAACTGTATGTAACATGATAAATACTCAACTTCACGATCAACGCGTTGTCCTCATTACCCAAGACTCGTTTTATCACTCATTGAGCGACAAGATGTTGCAGAAAGTTAATGAGTATAATTTTGATCATCCTGATGCCTTTGATACAAAGCTTTTGCTTTCAACATTGGAGAAATTAAAATGTGGACAACCTGTTACTATACCAAATTATGATTTCAATTCCCATAAGAGAATTGAAGCTGGACGTCAGGTTCAACCTGCAAATATAATAGTTTTAGAAGGGATATTAGTTCTTCATGATTCTGGTGTTCGTAATCTTTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGCCTTACACGAAGGATGCAACGCCTTGCTATTGAGCGTGGGAGGAATATTGAGAATGTTTTGGATCAATATTCCAGATTTGTAAAGCCAAGTTTTGAAGATTTTGTATTGCCAACTAAAAAGTATGCTGATATTATCATCCCGAGTGGAGGAGATAATGATGTTGCCATTGACTTAATAGTACAAAACATACGCATGAAGCTTGGCCAACATGATTTGTGTAAAATATATCCCAATATTTTTGTTATATGTTCAACATTTCAGATAAAGGGAATGCACACTCTTATCCGAGATGTTAAGACAACAAAGCATGACTTTGTCTTCTATTCAGATCGTCTTATTAGACTGGTTGTCGAGCACGGATTGGGTCATCTTCCTTTTTCTGAAAAACAGGTGATAACACCAACAGGATCTGTATACTCTGGTGTAATTTTCTGTAGTAGGTTGTGCGGAGTATCAGTCATTAGAAGTGGAGAAAGCATGGAAAATGCATTAAGAGCGTGTTGTAAGGGAATCAAAATTGGTAAAATCCTTATTCATGGGCATGGCACAAATGGTCGACAGTTAATCTATGAGAAGCTACCAAAAGATATTGCAAGTCGTCATGTGTTGCTACTCGATCCAGTTTTGGCCACAGGAAACTCTGCAGTCAAAGCTATCTCTCTGCTTCTCAACAAAGGTGTATCAGAATCTAACATTATATTTCTAAATTTAGTAGCATCACCACAAGGAATAAATGCAGTTTGTGAGAGATTTCCAATGATTAAACTTGTGACATCAGAGATTGATGCATCACTGAATGAGAAATCTCATGTGATCCCTGGCCTAGGGCAGTTTGGTGATCGTTACTTTGCGACTGATGATTAG 1452 0.3671 MEMNNFEKEATPLNLNIEDKHTLQSNGFKAPSSPKQPFFIGTNDIYIFYFQFHYFSFVFLQNEFFLGVAGGTASGKTTVCNMINTQLHDQRVVLITQDSFYHSLSDKMLQKVNEYNFDHPDAFDTKLLLSTLEKLKCGQPVTIPNYDFNSHKRIEAGRQVQPANIIVLEGILVLHDSGVRNLLNMKIFVDEDSDVRLTRRMQRLAIERGRNIENVLDQYSRFVKPSFEDFVLPTKKYADIIIPSGGDNDVAIDLIVQNIRMKLGQHDLCKIYPNIFVICSTFQIKGMHTLIRDVKTTKHDFVFYSDRLIRLVVEHGLGHLPFSEKQVITPTGSVYSGVIFCSRLCGVSVIRSGESMENALRACCKGIKIGKILIHGHGTNGRQLIYEKLPKDIASRHVLLLDPVLATGNSAVKAISLLLNKGVSESNIIFLNLVASPQGINAVCERFPMIKLVTSEIDASLNEKSHVIPGLGQFGDRYFATDD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00487 483 SUPERFAMILY PRTase-like 265 481 IPR029057 -
Gma19g00487 483 CDD PRTases_typeI 344 454 IPR000836 -
Gma19g00487 483 TIGRFAM udk: uridine kinase 64 262 IPR000764 -
Gma19g00487 483 Pfam Uracil phosphoribosyltransferase 280 481 - -
Gma19g00487 483 Pfam Phosphoribulokinase / Uridine kinase family 66 251 IPR006083 GO:0005524|GO:0016301
Gma19g00487 483 CDD UMPK 65 260 IPR000764 -
Gma19g00487 483 Gene3D - 266 481 IPR029057 -
Gma19g00487 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 255 IPR027417 -
Gma19g00487 483 PANTHER URIDINE KINASE 60 479 - -
Gma19g00487 483 PANTHER URIDINE KINASE-LIKE PROTEIN 5 60 479 - -
Gma19g00487 483 Gene3D - 61 265 IPR027417 -
Gma19g00487 483 PRINTS Uridine kinase signature 194 204 - -
Gma19g00487 483 PRINTS Uridine kinase signature 208 219 - -
Gma19g00487 483 PRINTS Uridine kinase signature 93 104 - -
Gma19g00487 483 PRINTS Uridine kinase signature 63 80 - -
Gma19g00487 483 PRINTS Uridine kinase signature 138 153 - -
Gma19g00487 483 PRINTS Uridine kinase signature 230 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00487 Gma-Chr19 8457132 8466852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00487 61 483 PRT Gene Family AT4G26510 73.050 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00487 K00876 - gmx:100803453 774.622