Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00470 ATGGTGGTCGCGATCAAGGTCCTCCACGACGGGTTTGTGAGGATGGAGCAGATGAAGAGGGAGATCGAGAGCATGCTGGTGGAGATGGACTGCACCAAGATGATCCTGGACTCGCGGCAGAGGATCGTGGAGTACTGGGTCTTCACTGTAGAAAAATCAAAAGTTTCATCGAACCACTTTTTTGTGGGTGGTCTTTGGGTCGTAGCGGTTGATGATGACACCACTATTCTTGAAATCATTAAACAAATGGGTTTTAAATGCCATTATCGTGTTGCCACATTCTCTGATGCCCCAGATGCTTTGAATTATGTTCTGGAGAATAAAGATCGCATTGATGTGATACTCGTTGATGTTCACTTGCCAAATATGGATGGCTATGAATTCCTTAAGCATATCAATAAGGAAATTGATATCCCTGTCATCATCATGTCTGTTGATGGTTCTACGAGTGCTGTGAGGAAGGCTATTACACATGGGGCATGTGATTATTGGACCAAGCCTTTCAGTGAGAACCAATTCAAGATTATGTGGAAGCATGTTGCTATGAAAGCCTGGAATGAAAAGAAGCTACAAAAAAAAGATTTTTCTGAATTTGCTTCTTCTGTTCTTGATGCAAACTTGAAGGACCAAAAAGAGATCAGTTCCAATTCCAAAGAATCTGATGTTGATGATTGTGATGCACAACCAAAGAAGCCCCGTATAGCATGGAAAGGAGAACTGCATTGCCAATTTGTCAAGGCAGTGATGCATATTGGGCTTGACAAGGCACAGCCAAAGAAGATTCTTGAAGTGATGAACATTCCTGGTTTGACAAAAGACCATGTTGCCAGTCATTTGCAGAAATATAGATTTGATTTGAAGAAATCTAATGAAGTGGCTGTGCAACAGAATGAGATGCAATTGCCAAACAGTATACAATCAACAGAACCTATTGATTGGTTTAATCCTGAGGGTTGGACCAGTCAACCTGATGAATCTATCTTGGAAAGTGTTTCTGTTCAATCTCAGAATCAGCAACAAGGAGGAGGATCTTTGCATGTCTTGCCACCACCACTAGATGGATTTCGAATTCAAACAGATTGGTGTAATATGAATTTCTGA 1101 0.4133 MVVAIKVLHDGFVRMEQMKREIESMLVEMDCTKMILDSRQRIVEYWVFTVEKSKVSSNHFFVGGLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNMDGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMKAWNEKKLQKKDFSEFASSVLDANLKDQKEISSNSKESDVDDCDAQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDHVASHLQKYRFDLKKSNEVAVQQNEMQLPNSIQSTEPIDWFNPEGWTSQPDESILESVSVQSQNQQQGGGSLHVLPPPLDGFRIQTDWCNMNF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00470 366 Gene3D - 228 289 - -
Gma19g00470 366 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 337 IPR045279 GO:0009736
Gma19g00470 366 ProSiteProfiles Response regulatory domain profile. 66 181 IPR001789 GO:0000160
Gma19g00470 366 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 231 284 IPR006447 GO:0003677
Gma19g00470 366 SUPERFAMILY CheY-like 64 182 IPR011006 -
Gma19g00470 366 SMART REC_2 65 177 IPR001789 GO:0000160
Gma19g00470 366 Gene3D - 66 198 - -
Gma19g00470 366 SUPERFAMILY Homeodomain-like 228 288 IPR009057 -
Gma19g00470 366 Pfam Response regulator receiver domain 67 173 IPR001789 GO:0000160
Gma19g00470 366 CDD REC_typeB_ARR-like 67 181 - -
Gma19g00470 366 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 58 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00470 Gma-Chr19 8022907 8025598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00470 61 296 Response Regulator Gene Family AT4G31920 41.004 5.41e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma19g00470 Response_reg 2.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00470 - K14491 gmx:100793391 739.569