Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00464 ATGGCCACATACCCCACTAAGGAGAAGGTTAACTTTCATCCATTCCCAGAAGGTCTTACGGTCCTTGCAGTTGATGATGACCACAATGTTCTTGTATTCATTAAAAGAATGTGTATTCAATGGAATTATCGCGTTATTGCATTCTCTGATGCCCCATCTGCTTTGAATTTTGTGCGGGAGAAAAAAGGTTGCAATATTGATGTGATACTCACTGAAGTTCATATGGCAAATATGGATGGCTATGAATTCCTTAAGCATGCCACTAAGGAAATTAATGTTCCTATTATCATGATGTCTCATGATAATGCTACGACTACGAGTGCTTTGATGGAAGCTGTTAAACATGGGGCTTGTGATTTTTGGATTAAGCCTTTGAATGAAAACCAATTCAGGATATTGTGGACGCAAGTTGCTAGGAAAATGTGGAATGAAAAGATGCTAGCAAAAACAGATGATTCTTCTGTTCATGGTACTAGAGTGATGAATACAGAAAAGAACAGCTCAACCCCACCAAAGAAGCCCCGTTTAGTGTGGCAAGGAGAATTGCAACAGCGATTTGTCAGGGCTATAATGCATCTTGGGCTTGATAAGGCACAACCAAAGAGGATTCTTGAAGTGATGAATGTTCCCGGTTTGACAAAAGAGCATGTAGCTAGTCATTTGCAGAAATATAGAGTTAATTTGAAGAAATCTAATAAAATGATCACTGCGCATCAAGAGAATGAGATGCAAATGCAATTACCAAACAATATAGAATCCAGGGGCATGGTAGGCGCATCTAGCATTTTTCCCTATGCAGTCCTTCATCCTGAAGAACAATGGCCTAACTATTACCATCTTGAAGAACAACAAGGTGTGCCATATATAGCAAAATATCCTTCTAACATGATCAATAATGCCAAGAATTTTGCTCAGCCAATAATGACAGTAGATGATGCACCTATATGTGGAGTATTGCCCCAGTCTAATACAGTGACAGCCAACAATGCATTGATGCATCCAGATATGTATGTAGCAGCAGCAGCATCATCAGAGGCAGCAAACAGTGATGCATTATCAAATTCGTTCAATGAACTTTCAGCCATCTTGCATGGCAATTATAATTTTTAG 1110 0.3919 MATYPTKEKVNFHPFPEGLTVLAVDDDHNVLVFIKRMCIQWNYRVIAFSDAPSALNFVREKKGCNIDVILTEVHMANMDGYEFLKHATKEINVPIIMMSHDNATTTSALMEAVKHGACDFWIKPLNENQFRILWTQVARKMWNEKMLAKTDDSSVHGTRVMNTEKNSSTPPKKPRLVWQGELQQRFVRAIMHLGLDKAQPKRILEVMNVPGLTKEHVASHLQKYRVNLKKSNKMITAHQENEMQMQLPNNIESRGMVGASSIFPYAVLHPEEQWPNYYHLEEQQGVPYIAKYPSNMINNAKNFAQPIMTVDDAPICGVLPQSNTVTANNALMHPDMYVAAAASSEAANSDALSNSFNELSAILHGNYNF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00464 369 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 14 281 - -
Gma19g00464 369 Gene3D - 170 231 - -
Gma19g00464 369 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 281 IPR045279 GO:0009736
Gma19g00464 369 SUPERFAMILY Homeodomain-like 171 230 IPR009057 -
Gma19g00464 369 Pfam Response regulator receiver domain 21 130 IPR001789 GO:0000160
Gma19g00464 369 SMART REC_2 19 134 IPR001789 GO:0000160
Gma19g00464 369 CDD REC_typeB_ARR-like 21 138 - -
Gma19g00464 369 Coils Coil 221 241 - -
Gma19g00464 369 SUPERFAMILY CheY-like 17 144 IPR011006 -
Gma19g00464 369 Gene3D - 15 145 - -
Gma19g00464 369 ProSiteProfiles Response regulatory domain profile. 20 138 IPR001789 GO:0000160
Gma19g00464 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 173 226 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00464 Gma-Chr19 7651934 7653863 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00464 15 230 Response Regulator Gene Family AT4G31920 36.364 4.79e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma19g00464 Response_reg 1.8e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00464 - - gmx:102662773 747.273