Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00455 ATGGCTCCCAAACATCCTAGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAAGAAGGAGTTGCCTCCACGCCCTTCAGATCGTAAGGGGAAAACAAGCAAGCGAGTGCACTTTGTGAGGAACCTCATTCGAGAGGTTGCCGGCTTTGCACCTTATGAAAAGCGAATAACTGAGTTGCTCAAGGTTGGAAAAGATAAGAGGGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAGCGCGCAAAGAAGAAGAGAGAGGAGATGTCCAATGTTCTCCGGAAGATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 333 0.4805 MAPKHPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00455 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gma19g00455 110 Gene3D 60S ribosomal protein L36 2 108 IPR038097 -
Gma19g00455 110 MobiDBLite consensus disorder prediction 87 110 - -
Gma19g00455 110 MobiDBLite consensus disorder prediction 1 38 - -
Gma19g00455 110 MobiDBLite consensus disorder prediction 79 110 - -
Gma19g00455 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gma19g00455 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gma19g00455 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00455 Gma-Chr19 7521808 7523830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00455 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 6.63e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00455 K02920 - gmx:100526979 221.476