Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00450 ATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAGTTTATGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGAGTCAAACATTATTCATTGTGACATCAAACCAGAAAACGTGCTCCTAGATGATAATTTCAGGGTCAAGGTTTTTGATTTTGGTTTGGCTAAGCTCATGACACGTGAACAAAGGCATGTGTTCGCAACACTTAGAGGCACTACAGTGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGATGTTTATAGCTATGGTATGGTGTTGGTAGAGATCATTAAGGGGAGGAAAAACTATGATCCCAGTGAAACTTCAGAGAAATCCTATTTCCCATCTTTTGCTTTTAAGATGGTGGAAGAAGGGAATGTGACAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAATGATCAAAGGGTTCACATTTCTGTGAATGTTTCATTGTGGTCctaa 537 0.3818 MANGSLDKWIFNKNKEEFMLDWDTRYNIALGTAKGLAYLHEDCESNIIHCDIKPENVLLDDNFRVKVFDFGLAKLMTREQRHVFATLRGTTVYLAPEWITNCAISEKSDVYSYGMVLVEIIKGRKNYDPSETSEKSYFPSFAFKMVEEGNVTEILDSKVETYENDQRVHISVNVSLWS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00450 178 SMART serkin_6 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00450 178 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00450 178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Gma19g00450 178 SUPERFAMILY Protein kinase-like (PK-like) 1 158 IPR011009 -
Gma19g00450 178 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 177 - -
Gma19g00450 178 Pfam Protein kinase domain 2 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00450 178 Gene3D Transferase(Phosphotransferase) domain 1 1 177 - -
Gma19g00450 178 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00450 Gma-Chr19 7352593 7353129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00450 1 159 Receptor kinase-like Gene Family AT5G20050 46.746 1.63e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma19g00450 Pkinase 8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00450 - - gmx:100787500 336.265