Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00447 ATGCGAATGAGTTGTAACGGATGTCGTGTTCTGCGCAAAGGGTGTAGCGAAGATTGTAGTATAAGACCGTGTTTGCAATGGATCAAGAACCCGGAGTCACAAGCTAATGCAACTGTTTTTCTTGCCAAGTTCTATGGTCGTGCTGGCCTCATGAACCTCATCAACGCTGGTCCTGAAAGCCTTCGTCCTGCCATTTTTCGATCCTTGTTATACGAAGCATGTGGTCGAATTGTGAACCCAATTTATGGTTCGGTGGGTTTGCTATGGTCCGGGAGCTGGCAGCTATGTCAAGCCGCCGTGGAAGCCATTTTGAAAGGCGAGCCGATCACGCCGATAACATCCGAAGCCGCGGCTAATGGGCGGGCCCCACCACTCAAGGCCTACGACATACGCCATGTGTCAAAAGACGAGAACTCGGCAAACGAAACTCCAAAGGCCAAGACCCGGTCCCGGTTCAACCGAACCGGTAGCACACTCATTAAACCAAAGGCTAGCAAGGGAACCCCAACTGGGTTCGTTCCGATTGAACCGGTTGAACCGGAGACAGCAAACCGGACCACAAGCCACGAGTCGGGGCTGAGCCACTTGTCGGAAGCCGCCGTGATGGTGGAGGGAGAAAGCAAAGAAAGCGAAAGCGATGTGTCAGTGGAAACTTCGAATCTATTTCACGAAGAACCGGAGTCGGTTGCGAAGACGAGTGATCGAACCGGTGAAAGTGGTAATGAAATCGGCTTGGAATTGACGCTCGGGTTTGAACCGGTCTCACGTGTGCATCACGTGGTTCCAATGAAGAAGAGAAAGATAATTGCGTCGAAGAGTTATGGTGACTCGGCTGAGAAAGACTCGTGTAAGATGGAGCTGGGGCTTGAGTACCCGGCTTGA 882 0.5193 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLINAGPESLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAILKGEPITPITSEAAANGRAPPLKAYDIRHVSKDENSANETPKAKTRSRFNRTGSTLIKPKASKGTPTGFVPIEPVEPETANRTTSHESGLSHLSEAAVMVEGESKESESDVSVETSNLFHEEPESVAKTSDRTGESGNEIGLELTLGFEPVSRVHHVVPMKKRKIIASKSYGDSAEKDSCKMELGLEYPA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00447 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 290 - -
Gma19g00447 293 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Gma19g00447 293 MobiDBLite consensus disorder prediction 159 192 - -
Gma19g00447 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 290 - -
Gma19g00447 293 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gma19g00447 293 MobiDBLite consensus disorder prediction 206 239 - -
Gma19g00447 293 PIRSF AS2 1 292 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00447 Gma-Chr19 7262549 7264101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00447 1 289 AS2 family AT3G02550 59.310 5.28e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma19g00447 LOB 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00447 - - gmx:100786490 577.015