Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00422 ATGGCCGCCTTAGTGAAGCTGACTCTAGAAGATATTTCCAACAGCTTATTGACGCCTGAAAATCTTTTACTTGATTCACTAGGAAATATAAAGATTTCCGATTATGGTTTGAGTGCATTTCCTGAGCAGGGGGCGAGTATCCTTCggacaacttgtgggacaacttgtgggaGTCCGAACTATGTGGCTCCTAAGGTACTCAGTCATAAGGGTTACAACGGTGCTGTGGCAGATGTTTGGTCCTGTGGAGTTATCCTCTTTGTCCTACTGACTGGATATCTTCCTTTTGATGAACTGTATGGTATTTTCCCTTTAAAAGTTGAGACATTCACAAAAGTTGGACAATTGGAAAAGGCCAGTGATGCTGAACAGAGTATTCAAGTTGACGGTTCAAATAGAGGCACCGGTCTGAGTTCTCCTATTCCTCTTCCAGCACGTCCTCAAAGAATTTCTACTGGAAGAGAATTATTCTACCAGTAA 480 0.3979 MAALVKLTLEDISNSLLTPENLLLDSLGNIKISDYGLSAFPEQGASILRTTCGTTCGSPNYVAPKVLSHKGYNGAVADVWSCGVILFVLLTGYLPFDELYGIFPLKVETFTKVGQLEKASDAEQSIQVDGSNRGTGLSSPIPLPARPQRISTGRELFYQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00422 159 SMART serkin_6 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00422 159 MobiDBLite consensus disorder prediction 124 138 - -
Gma19g00422 159 Gene3D Transferase(Phosphotransferase) domain 1 16 129 - -
Gma19g00422 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00422 159 MobiDBLite consensus disorder prediction 124 159 - -
Gma19g00422 159 SUPERFAMILY Protein kinase-like (PK-like) 17 99 IPR011009 -
Gma19g00422 159 PANTHER - 17 99 - -
Gma19g00422 159 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 99 - -
Gma19g00422 159 Pfam Protein kinase domain 18 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00422 Gma-Chr19 6610298 6611653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00422 17 99 CBL-interacting serine-threonine protein kinases AT4G24400 78.313 1.71e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma19g00422 Pkinase 4.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00422 - K07198 gsj:114398533 170.244