Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00421 ATGTTTCGGATAAGCAAGATGCACGCCAAAGGTTCTAATCTCGGGAATAGTTGCAAACAAACACCAGGAAGTTCTTCATCATTTGTCCCAAACCATCCTTTGCAGAGAGATTTTGATTTAAGACATCAAGATTATATAATGAATCAAGCAAGGTTCTTCTTTGACTGGCGAAAAGATCCTGAAATTAGCCAATGCCGTAACTTGATAAAAAATGATATTTCTACAATTTTGCATTCCCGACATCCTAATGATCAAGGACAGGCCTCTGTTTTGGCAAACTTTCTGGAAAATCGGCTATTTGTTGAGGCTGCTTCAAAGGATGAGTATATCAACCGACAGACAATTATGCAACGATTGGATACACAACTCAAGAAGTTGTATGCCCCAAAATGCAGCCAAGTAAATAGCTCTATTGCTTGCACATCCCAGATGGTGCCCTCTTTTGGGTTATTGCAAGCTAGGTCTAATGGAAGTGTACCAGAACCTGCTTTTCATAACGTGGCTGGTCCTATCACCAATGCAACCAATTATTGTGCAGTGCCTGTAGATAATAAAAATAGCTTCCCAAATGGAGGGTTGTCTTATTCTTCTTTTGTTCCCCAACCGGTTTTTTTACCAGATAACCATCCATCCATCGCTACATGCACTGATTTGGATGTGCTTCCTAACTCTTTTGTTTCTGGTGGGAGAAGCAATTTGAAAGCTTGCTCCAAGTCAATTAGTTCCTATTTTCCTCAGCGACAGGCAGACGATTGGAAGACGCTTCTGGTGAAGTATGGAGATTGTTCTAGGACTACAACGGGAAAATCCGTCCAATCTGAATCTTCAAATTTGATGACCCCTCAAGATGCCTTGAGGGAATTTTCAAAAGTTTTTGATCTTCCTCCTGTCCCGAGAAGCCTAGGAGATATTAGGCAACATCAACACCGGAAGCGAGATTTTCAACGGAATTTAAAACCTTTTATGCAGCCATATGGGCTTCCTGGTAAAACTAATATGGCCCAGCCTAATGCATTCTCCAATCAAGGTGAACGTTGCAGTCAAATGTTGGGGCATAAAACATTGAAACAACCACAACTTTTCAAAAGAAGTCTCAATGGGGATCAACAGTTCACTTCAGGGAGCTCAGTAGATCTTTTTGGTTTAGATGATTCTGATAATATGAATTCATGTGGTAGTTCCAAAGTTTCGGTTGAACAGAGGATCATGCTTGAATATCTTTATTTGAAGAATTTTAACAATATTTCACGGGGTAATGTTATGAAATATCTGCATTCAACAGTTTGTCTTAAAGGGACATGTAATTGTGGATGGTATATCAAGCTATTATTGCATTTTGATGACTGTAAAGATGATGGTTGTCGTACGTGTTACTCTTGGAAATTGCATGGCACTGATATTCTTGGGGGTCATTTGAAATTTCCTGATATTATGGGTTCTGTTGAAAGAAAAAATGACGCTCCTTCTGGAAATACTGAAGCCATGCTACCACCTGAAAAAAGAAGAAAAATGGAGCCCGCTTTTGGTGTCCCTTTAATTAATAATGCAAGTTTGGATCAGTCGACTCAGAAAATGGTTCACCCTCGTTCTTCTGAAGCTCTTTCAGAATTGCcattgagccaaaaagctgatcaagagatggagatgtcaccaaatccaacagctaatagtgtacatatggaggacaatcaaggaaaaatcaggttgaaccaagatgagataaatgctacaaaagaagccattaagccaaaagttgatgaagagaaggaaaggaagtccccaaatccaacacttaatactgcatatatggaagacataaaaggcagaattgaattggaccaggatgagataaatgctacaaaagaaatcattgagccaaaagttgatcaagagatggaaaggatgtcccaaaatccaacagttactgtagatatggagggcatacaagccataaccgggttcaaccaggatgggataaatgccacaaaagaagtcattgagccaaaatttgatgaagagaaggaaaggaagtccccaaattcaatagttaatactgcagataaagaggacacacaaggcagaaCTAAGTTCATCCAACATGGAATAAATGTTGATCTAGAGATGGAAAGGAAGTCCTCAAAAACAACAGTTAATACTGTTTCCTTAATTGATTTTTTCACAAGTAATCAAATAAAGGAACACATTACAAGCCTGAGAAAGCAATTTAATCAGAGTACAATGGTTGAAGAATCAGGAAGTGATGTTTACACATGCCAATTATGTGGAATGGGAACACTTTCTTTTGCCCCCGTGCCAATCTATTGCTTTTGTTGTGGCATCCGCATCAAGCGAAACGCATGCTATTACTATAGAAGAGAAGAAGATGATACACAGCATTGCTTTTGCAGTGTTTGCTTTAGGACTTCTCGAGGTGGGAACATCAAATTCAATGGAACATCTGTTTCCAAGACAGATCTTGATAAAAAGACAAATAATAGAGAATTTGAAGAATCGTGGGTTGAATGCAATAAATGCAAATGTTGGCAGCATCAAATATGTGCACTCTACAACGATAAAAGAGATTTGGACTACAGAGCTGAGTATACATGTCCTATATGCCGCTTAAAGGAAATTGGAAATGGAATGCATGCACCCTTACCGAAGACAGCGGCTATGTTTAGTGCTAATGACTTGCCCAGAACCATGCTTAGCGACCACATAGAGAGCAGACTTTTTAAGCGTCTCTGGCAAGAGGATGAAGATTGGGCAAAAGCAGGGTATAAGAATCTTGATGAGGTTTTCGAAGCAGAAAGTCTTTCTGTTAGAGTTGTGTTATCCGTTGACAAACAATTGAAAGTGAAGAAACAGTTTCTGGACATATTTGGGGAGGAGAATTACCCTTCTGAATTTCCTTATACATTAAAAGTTATTCTTCTGTTTCAGAAGATTGAAGGAGTGGATGTATGCCTTTTCGCAATGTATGCTCAGGAGTTTGGCTCAGAATGTGGCTATCCTAATCAGCGTTCTGTGTACATTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTAAAAGAGTGACTAAAAGTGGAGAAGCTCTTCGTACCATCGTTTACCATGAGATATTGATTGGATATCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTATCTATGGGCCTGTCCACCTATGAAGGGAGAAGATTATTTACTATATTGTCATCCTGACACCCAAAAAACTCCCAAGAAAGATAAATTACGGCAGTGGTATCATTCAATGCTAAGAAAGGCCGCTGAAGAAAATATCGTTGTTGGTTTAACTAACTTACATGATCATTTCTTTGTTACTACTGGAAGTTGTGACTCCAAGGTAACAGCTGCTCGTTTGCCTTACTTTGATGGGGACTTCTGGTCTGGTGCTGCTATGGATAAAGCCAGGCACATTGAACAAGAGTGTGGAGGAGATTATAAAATGATCTTCGATAAAGTAGTATCGAAAAGATGTTTAAAGTCCATGGGACATGTAAATCCTCCTTCTGAAGGAACTGCCAAAGACATTCTAGTGATGCATAAATTGGGACAAACCATATTACCTTTCAAGGAAGATTTTCTCGTAGTTCAATTTCAGTATGTTTGCATGCACTGCCATGAAGTAATAGCAAATGGGAAGCGATGGTTTTGCACCGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGTTCACTCACACATTTCAGCCAAAGGCGAGAGGCATAGACTTCATCAGGTCCTCATGGATGACGTCCTTGGTGATACTAAGGAGAATGATATCATCCTTGATAATGGGTTATTTGATTCCCGACACAACTTTCTGAGCTTTTGCCAAAGGAACAGGTTTCAGTTTGACTCACTCCGCAGAGCCAAGTATTCCTCAATGATGATCCTCTACCTTGTGAAGAATCCTACTCTTCTGATTGTTGGAACAACATGCCGCGTTTGCTCTAAAAACAATGTGTCCCAGCGCTACTGGAAATGTGAGAATTGCCCGGAATTCACTTTGCAGCAACTTCTGGATGTTATTGAACATGCATCTCTGTGTCACTCAATCAAAACTCAACCATGCACTTACCCACATTGCAGTCAAATTAAAAAGCTGTTCGCTCATGCCAGTAGGTGTGAAGTTCGACTTTCTGGGGGGTGCCAATTTTGTAAGAAGGTTTGGCAGGGACTGACTTTACACTCAAGGAATTGCAAAGACTCAGCATGTCGCATACCCCGTTGCATGGATCTGAAGAAACAAATAGAATGGATAGCAACACAAGCTGAATCGCGGCTTAGGGCTGCAGTTTTGCAATCGGAAGATAGCAGATAA 4359 0.3572 MFRISKMHAKGSNLGNSCKQTPGSSSSFVPNHPLQRDFDLRHQDYIMNQARFFFDWRKDPEISQCRNLIKNDISTILHSRHPNDQGQASVLANFLENRLFVEAASKDEYINRQTIMQRLDTQLKKLYAPKCSQVNSSIACTSQMVPSFGLLQARSNGSVPEPAFHNVAGPITNATNYCAVPVDNKNSFPNGGLSYSSFVPQPVFLPDNHPSIATCTDLDVLPNSFVSGGRSNLKACSKSISSYFPQRQADDWKTLLVKYGDCSRTTTGKSVQSESSNLMTPQDALREFSKVFDLPPVPRSLGDIRQHQHRKRDFQRNLKPFMQPYGLPGKTNMAQPNAFSNQGERCSQMLGHKTLKQPQLFKRSLNGDQQFTSGSSVDLFGLDDSDNMNSCGSSKVSVEQRIMLEYLYLKNFNNISRGNVMKYLHSTVCLKGTCNCGWYIKLLLHFDDCKDDGCRTCYSWKLHGTDILGGHLKFPDIMGSVERKNDAPSGNTEAMLPPEKRRKMEPAFGVPLINNASLDQSTQKMVHPRSSEALSELPLSQKADQEMEMSPNPTANSVHMEDNQGKIRLNQDEINATKEAIKPKVDEEKERKSPNPTLNTAYMEDIKGRIELDQDEINATKEIIEPKVDQEMERMSQNPTVTVDMEGIQAITGFNQDGINATKEVIEPKFDEEKERKSPNSIVNTADKEDTQGRTKFIQHGINVDLEMERKSSKTTVNTVSLIDFFTSNQIKEHITSLRKQFNQSTMVEESGSDVYTCQLCGMGTLSFAPVPIYCFCCGIRIKRNACYYYRREEDDTQHCFCSVCFRTSRGGNIKFNGTSVSKTDLDKKTNNREFEESWVECNKCKCWQHQICALYNDKRDLDYRAEYTCPICRLKEIGNGMHAPLPKTAAMFSANDLPRTMLSDHIESRLFKRLWQEDEDWAKAGYKNLDEVFEAESLSVRVVLSVDKQLKVKKQFLDIFGEENYPSEFPYTLKVILLFQKIEGVDVCLFAMYAQEFGSECGYPNQRSVYISYLDSVKYFRPKRVTKSGEALRTIVYHEILIGYLDFCKKRGFTTCYLWACPPMKGEDYLLYCHPDTQKTPKKDKLRQWYHSMLRKAAEENIVVGLTNLHDHFFVTTGSCDSKVTAARLPYFDGDFWSGAAMDKARHIEQECGGDYKMIFDKVVSKRCLKSMGHVNPPSEGTAKDILVMHKLGQTILPFKEDFLVVQFQYVCMHCHEVIANGKRWFCTECKKFQECERCHTVHSHISAKGERHRLHQVLMDDVLGDTKENDIILDNGLFDSRHNFLSFCQRNRFQFDSLRRAKYSSMMILYLVKNPTLLIVGTTCRVCSKNNVSQRYWKCENCPEFTLQQLLDVIEHASLCHSIKTQPCTYPHCSQIKKLFAHASRCEVRLSGGCQFCKKVWQGLTLHSRNCKDSACRIPRCMDLKKQIEWIATQAESRLRAAVLQSEDSR 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00421 1452 Gene3D TAZ domain 1345 1451 IPR035898 -
Gma19g00421 1452 PANTHER HISTONE ACETYLTRANSFERASE HAC2 603 1428 - -
Gma19g00421 1452 ProSiteProfiles Zinc finger PHD-type profile. 799 876 IPR019787 -
Gma19g00421 1452 SMART TAZ_2 1345 1424 IPR000197 -
Gma19g00421 1452 MobiDBLite consensus disorder prediction 10 32 - -
Gma19g00421 1452 SUPERFAMILY RING/U-box 1303 1349 - -
Gma19g00421 1452 Pfam TAZ zinc finger 1349 1423 IPR000197 -
Gma19g00421 1452 SUPERFAMILY RING/U-box 1188 1254 - -
Gma19g00421 1452 Pfam Histone acetylation protein 935 1139 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gma19g00421 1452 Gene3D - 1206 1260 IPR043145 -
Gma19g00421 1452 MobiDBLite consensus disorder prediction 542 561 - -
Gma19g00421 1452 CDD PHD_HAC_like 801 873 - -
Gma19g00421 1452 ProSiteProfiles Zinc finger ZZ-type profile. 1208 1267 IPR000433 GO:0008270
Gma19g00421 1452 SUPERFAMILY TAZ domain 1347 1428 IPR035898 -
Gma19g00421 1452 MobiDBLite consensus disorder prediction 545 561 - -
Gma19g00421 1452 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 834 877 IPR013083 -
Gma19g00421 1452 PANTHER CBP/P300-RELATED 603 1428 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gma19g00421 1452 ProSiteProfiles Zinc finger TAZ-type profile. 1342 1426 IPR000197 -
Gma19g00421 1452 SMART KAT11_2 928 1220 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gma19g00421 1452 SMART PHD_3 801 874 IPR001965 -
Gma19g00421 1452 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 892 1319 IPR031162 GO:0004402
Gma19g00421 1452 SUPERFAMILY FYVE/PHD zinc finger 835 876 IPR011011 -
Gma19g00421 1452 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00421 Gma-Chr19 6601172 6609398 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gma19g00421 HAT_KAT11 4.2e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00421 K04498 - gmx:102664049 2991.83