Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00386 ATGCATGCTTTAAGGATGCACAGCCCCACTGAGAGGCATATGATGATGCATGGAGGCAATGGATCAGGTGATTCAGGACTTGTTCTATCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCATGAAAGGTTCATAGAAGCAGTCAATGAACTTGGCGGAGTAGACAAAGCTACACCAAAAATAGTATTGAAACTAATGGGGATTCCTAGACTTACTCTTTACCACTTAAAGAGTCATCTACAGACTGTAGTGCTGTTGCTGCCGCCGCCGTCCATGCTCGCGTCCGTCGCCGTCCGTGCTCGCGTGCGTGGTGCGCTGGTGCCAcgtcgcgtgcggggtgccgagtttgccgtcgtcgccgtcgtggtgcagCATCAACCATGGAAGCAACAGCCAGAATTTAAGAAGCAAGTGGAGTTCAAATGA 435 0.423 MHALRMHSPTERHMMMHGGNGSGDSGLVLSTDAKPRLKWTPDLHERFIEAVNELGGVDKATPKIVLKLMGIPRLTLYHLKSHLQTVVLLLPPPSMLASVAVRARVRGALVPRRVRGAEFAVVAVVVQHQPWKQQPEFKKQVEFK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00386 144 SUPERFAMILY Homeodomain-like 33 88 IPR009057 -
Gma19g00386 144 Pfam Myb-like DNA-binding domain 36 85 IPR001005 -
Gma19g00386 144 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 85 IPR006447 GO:0003677
Gma19g00386 144 Gene3D - 33 88 - -
Gma19g00386 144 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 85 IPR044848 GO:0003700
Gma19g00386 144 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 85 - -
Gma19g00386 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 91 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00386 Gma-Chr19 5929046 5931964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00386 7 84 G2-like Transcription Factor Family AT3G24120 58.974 5.53e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma19g00386 Myb_DNA-binding 7.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00386 - - gmx:100786282 166.007