Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00364 ATGCCCTTGCTCACAAACTTGCAACACATTGAGACACTCCTCAATGCACCAAACCCCACCGTTAGTGCATCCATTAAAAGATGGCACTCTGCATTCATGGCCATCTATTGTTCCCGAGCTATTATGTCACACTCCACTCTCAAGAAACCAAACAAAACCAAAGCAAAAGCCTCACCTTCACCAACACCAACACCAACACCATCTTTCACAGTTGTTGATTTGAACCCTCACCATTCCTTTGATATAGACCAAACAGCCCTCACCGATATTGTCAAAGAAAAAGAGCTTGAGAACCTTGATAGATTTGGTGGGGTTGAAGGGGTGGCTAAAGCCCTTCAAACCCACGTTGAGTATGGTATCAAAGGTGGTGATGATGATGCTGAAGACATCACACGTAGAAGACAAGTGTTTGGTTCCAACACTTACCACAAACCACCTTCCAAAGGCTTCTTTCACTTTGTGGTGGAAGCCTTTAAGGATGTCACTATTCTAATCCTCATGGTTTGTGCTGCTCTTTCCCTTGGCTTTGGAATCAAGGAGCATGGAATTAAAGAAGGTTGGTACGATGGTGGAAGCATCTTTGTCGCGGTGTTCATTGTTATTTCCTTGTCAGCAGTGAGCAACTTCAGACAGAATAGACAGTTTGACAAGCTGTCTCAAGTGAGCAATGACATACAAATTGATGTGGTTAGAAGTGGGAGGCGCCAAAATGTTTCAATCTTCGAAATCGTAGTTGGCGATGTTATTTGCTTGAAGATTGGAGATCAAGTGCCAGCAGATGGGTTGTTCATAGAAGGACATTCACTTAAAGTCGATGAAGCAAGCATGACAGGAGAGAGTGATCATGTTGAGATTAGTAGACAAAACCACCCTTTTCTGTTCTCAGGTACCAAAGTGGCTGATGGATATGCTAAGATGCTTGTTACTTCAGTTGGAATGAACACAACATGGGGCCAAATGATGAGTTCAATAAGCCAAGATATTGATGAGGAAACTCCTTTGCAAGAGAGATTAAACAAGCTGACATCATCCATTGGGAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTTGGTTAGGTACTTCACAGGTAACACAAAGGATGAGACTGGGATCAAAGAGTTCAATGGAAGCAGGACCAAGTTTGATGATATCATGAATGCTGTTGTGGGGATTGTTGCTGATGCAGTTACAATTGTTGTTGTTGCAATCCCTGAGGGTCTTCCTCTGGCTGTGACTCTAACTCTGGCTTATTCAATGAAGAAAATGATGGCTGACCAAGCAATGGTGAGAAAGCTCTCTGCATGTGAGACAATGGGTTCTGCTACCACAATTTGTACTGATAAGACAGGAACTCTCACACTTAACGAGATGAAGGTGACTAAGGTTTGGCTTGGCCTAGAACCGGTGCTAGAAAGTGCCTACACAAAGGTTGCTCCATTTGTTCTTCAATTGATCCAAGAAGGAGTGGCTCTAAACACTACTGGAAGTGTGCACAAGTCCAATAAATCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACAGAGAAAGCAATCCTATCTTGGGCTGTCTTGGAATTGAACATGGAGATGGAGAACTTGACAAGAAGTTGTTCCATCATTCATGTTGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGAAGGAAGGTAGACAACACAGTTAATGCACATTGGAAAGGAGCAGCTGAGATGGTACTAAAGATGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAGATCTTGACAATGATAGGATGTTGAAGTTTGAGCACATTATTCAAGGTATGGCTTCTAGTAGTCTTCGTTGCATTGCTTTTGCACATGTAGAAGTAGCTGAGGAGGAGCTTGTAGATGAAGAAGGGAATGCAATGGCGAAAGTGAAAGAAAATGGTTTAACATTGTTGGGGCTTGTGGGTATTAAGGATCCATGTCGTCAAGGGGTGAAGAATGCCGTGGAAGCATGCCAAAATGCTGGTGTGAATATCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCCATAGCAACCGAATGCGGCATACTTCGGCCTAATCAAGACACAGATGGAGCAGTGATTGAAGGAGAGGAATTCCGCAACTACACGCATGAAGAGAGGTTGGAGAAGGTGGAAAAAATCTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTAAAACAAAAAGGCCATGTAGTTGCTGTCACTGGGGATGGAACAAACGATGCACCGGCTCTCAAAGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCGAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGGTGGGGAAGGTGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTGGCAGCACTTGCAATCAACTTTGTGGCAGCAGTGTCAGCTGGGAAAGTGCCACTAACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAACCTACAATGGAATTGATGCACAAACCACCAGTGGGTAGAACAAAACCTCTCATCACCAATGTCATGTGGAGGAACCTATTGGCTCAAGCTTTGTACCAAATAGCAATTTTGCTGACCCTTCAATTTAAAGTGTTCAATGAATTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTAGGCATTATTGGCATAACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAATTTGCTGACACAGAGAGGCTAAATTGGGGACAATGGGGTATCTGCATTGGTTTAGCCGCAGTTTCCTGGCCAATTGGTTGGGTTGTGAAGTTAATACCTGTCCCAGATAAACCATTCCTCAGTTTTTTGAGTAAGAAGAAATGA 3012 0.4263 MPLLTNLQHIETLLNAPNPTVSASIKRWHSAFMAIYCSRAIMSHSTLKKPNKTKAKASPSPTPTPTPSFTVVDLNPHHSFDIDQTALTDIVKEKELENLDRFGGVEGVAKALQTHVEYGIKGGDDDAEDITRRRQVFGSNTYHKPPSKGFFHFVVEAFKDVTILILMVCAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSAVSNFRQNRQFDKLSQVSNDIQIDVVRSGRRQNVSIFEIVVGDVICLKIGDQVPADGLFIEGHSLKVDEASMTGESDHVEISRQNHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISQDIDEETPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKDETGIKEFNGSRTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKVWLGLEPVLESAYTKVAPFVLQLIQEGVALNTTGSVHKSNKSGSEFEFSGSPTEKAILSWAVLELNMEMENLTRSCSIIHVETFNSKKKRSGVLLRRKVDNTVNAHWKGAAEMVLKMCSRYYDASGIVKDLDNDRMLKFEHIIQGMASSSLRCIAFAHVEVAEEELVDEEGNAMAKVKENGLTLLGLVGIKDPCRQGVKNAVEACQNAGVNIKMITGDNVFTAKAIATECGILRPNQDTDGAVIEGEEFRNYTHEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTMELMHKPPVGRTKPLITNVMWRNLLAQALYQIAILLTLQFKVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGICIGLAAVSWPIGWVVKLIPVPDKPFLSFLSKKK 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 272 286 - -
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Gma19g00364 1003 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Gma19g00364 1003 Pfam Cation transporting ATPase, C-terminus 842 910 IPR006068 -
Gma19g00364 1003 Pfam Cation transporting ATPase, C-terminus 911 988 IPR006068 -
Gma19g00364 1003 Gene3D - 459 658 IPR023299 GO:0000166
Gma19g00364 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 729 838 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g00364 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g00364 1003 SFLD C1.7: P-type atpase like 431 810 - -
Gma19g00364 1003 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 79 990 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma19g00364 1003 Pfam Cation transporter/ATPase, N-terminus 103 173 IPR004014 -
Gma19g00364 1003 SMART Cation_ATPase_N_a_2 101 178 IPR004014 -
Gma19g00364 1003 MobiDBLite consensus disorder prediction 47 66 - -
Gma19g00364 1003 Pfam haloacid dehalogenase-like hydrolase 446 771 - -
Gma19g00364 1003 SUPERFAMILY HAD-like 447 862 IPR036412 -
Gma19g00364 1003 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 655 IPR023299 GO:0000166
Gma19g00364 1003 PANTHER CATION TRANSPORTING ATPASE 912 977 - -
Gma19g00364 1003 PANTHER CATION TRANSPORTING ATPASE 18 911 - -
Gma19g00364 1003 PANTHER CALCIUM-TRANSPORTING ATPASE 912 977 - -
Gma19g00364 1003 PANTHER CALCIUM-TRANSPORTING ATPASE 18 911 - -
Gma19g00364 1003 SFLD p-type atpase 431 810 IPR044492 -
Gma19g00364 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Gma19g00364 1003 Gene3D - 156 906 - -
Gma19g00364 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 990 IPR023298 -
Gma19g00364 1003 Gene3D - 128 325 - -
Gma19g00364 1003 Gene3D - 910 989 - -
Gma19g00364 1003 PRINTS H+-transporting ATPase (proton pump) signature 789 814 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g00364 1003 PRINTS H+-transporting ATPase (proton pump) signature 604 622 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g00364 1003 PRINTS H+-transporting ATPase (proton pump) signature 757 773 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g00364 1003 SUPERFAMILY Calcium ATPase, transduction domain A 226 323 IPR008250 -
Gma19g00364 1003 CDD P-type_ATPase_Ca_PMCA-like 130 890 - -
Gma19g00364 1003 Pfam E1-E2 ATPase 226 427 - -
Gma19g00364 1003 Gene3D - 446 802 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00364 Gma-Chr19 5499684 5502767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00364 10 1003 Primary Pumps ATPases AT3G22910 66.569 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00364 K01537 - gmx:100793918 1870.13