Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00357 ATGCAAAGCAGGGAAGTAGTCTCAGGCCTCAATTATTTACTCCCTTCAAACCCTTGTCCCTACCCTCCTAACAACAACAACTACACCACCATGTTCCAAAACAACATTAATCCCACATTTCAGTTCCAAAGATTCTCTAACCAAATATATGGCTATAACAATATTAACAACACTCCCTATCATAAAGTTCCCGACTTATTCAGTCCTCAATCCTCATGTATAAGCAGCAACTCCACTTCTGATGAGGCTGATGAGCAAAACCTGAGCCTCATCAACGAGAGGAAGCACAGGAGAATGATATCGAACCGCGAATCGGCGCGAAGATCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCACAAGTGGTGTGGCTCAGGAATGAGAACCACCAGCTCATGGACAAGCTGAACCATGTCTCAGAGAGCCATGACCAAGTGATGCAAGAGAATGCTCAACTCAAAGAACAAGCTTTGGAACTTCGCCAAATGATTAGGGACATGCAGATACATAGCCCTTGCCCCTCCTCCTTCATAACCCCTTTGGAAGATCATCATCATGATGTTGATCATGTGATTCCTTCAGCATATCTCAGATCTGATTCTTCAAACCAATTATCCAACTCGTGTAACAACAACATGGACGACCTCCTTGGCTGA 663 0.4465 MQSREVVSGLNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTPYHKVPDLFSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHSPCPSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00357 220 Coils Coil 138 172 - -
Gma19g00357 220 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Gma19g00357 220 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 112 IPR004827 GO:0003700|GO:0006355
Gma19g00357 220 CDD bZIP_plant_GBF1 95 146 IPR045314 GO:0003700|GO:0006355
Gma19g00357 220 Pfam bZIP transcription factor 94 152 IPR004827 GO:0003700|GO:0006355
Gma19g00357 220 Gene3D - 92 149 - -
Gma19g00357 220 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Gma19g00357 220 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 206 IPR044521 -
Gma19g00357 220 PANTHER BZIP TRANSCRIPTION FACTOR 1 206 - -
Gma19g00357 220 SUPERFAMILY Leucine zipper domain 94 144 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00357 Gma-Chr19 5415503 5416374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00357 19 184 bZIP Transcription Factor Family AT3G30530 57.310 1.63e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma19g00357 bZIP_1 4.2e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00358 13 15423594 15424491 Gma19g00357 19 5415503 5416374 GST
Gma19g00357 19 5415503 5416374 Gma18g02510 18 59201077 59202031 PCT
Gma19g00357 19 5415503 5416374 Gma08g02354 08 22976335 22977286 PCT
Gma18g02510 18 59201077 59202031 Gma19g00357 19 5415503 5416374 PCT
Gma08g02354 08 22976335 22977286 Gma19g00357 19 5415503 5416374 PCT