Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00352 ATGACAATTGGAAGTATTGAGCATAAGGCAAAGAAGACAAAATCAAGGAAGAACAAAGTAGTTGTTGATGAGAAGACACCTTTGATACCGAAGACTCATGATGCTGATGCTGAAGGCTTAGATGAATTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTATCCACCACAGCTATTGGTGCTGGGATCATGGGGTTACCAGCATGTGTGAAAAAGTTGGGAATGGTTCCTGGTCTTCTTGCTATAATCTTAACTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATCAGGAATTCCCGTGCAGGGAATCTTTCTTCTTATGGGAATCTCGTGGGGGATTCATTTGGCAAATTCGGAAAAGCTCTTGTGCAGATATGTGTTATAATCAACAACATTGGAATGCTTATTATTTACATGATTATTATTGGTGACGTGATTTCTGGAACATCTTCTAGTGAAATTCATCATTCTGGTGTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGACGTACATTTGTTCTTCTTTTTACAACATTTGCTGTGTTTGCACCTTTGTCTTGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGCTTAGCAGTTGCTTTTCTTGTTATTGCTGTGGGAATCTCAATTTTCAAGATTGCAATTGGAGGCATTGGGATGCCCAGACTCTTCCCGATCATTACTGATGTGGCCTCAGTTTTTGAACTGTTTACTGTAACTCCTGTGGTTGTGACAGCCTATCTGTGCCACTTCAATGTTCACAGCATAGATAATGAACTGGAGGACTCCTCACAGATACACGGGATTGTGCGTACTTCCCTTACTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGCTTCCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATTCTGATCTGGGAATCCCTTTTGGTTCTGTGCTCAATGACGCTGTCCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCATATTTCCATCATCTAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTATGGCCCTTATTGTTGCTTCCTTTTTGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGCAAGTTTATCATTCATATTTCCATCTGCCATCACCCTAAGGGATCGGTACAACATCGGAACTAAAAAAGACAAGATTCTATCAGTCTTTATGATAGTCCTCGCAGTCTTCGCGAATGTTGTGGCTGTATACAGTGATGCCTTTGCCCTGATCAAGAATAGTACAACTAAACGTGAGTGA 1395 0.4129 MTIGSIEHKAKKTKSRKNKVVVDEKTPLIPKTHDADAEGLDEFNGASFSGAVFNLSTTAIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKSIGFMIRNSRAGNLSSYGNLVGDSFGKFGKALVQICVIINNIGMLIIYMIIIGDVISGTSSSEIHHSGVLEGWFGVHWWTGRTFVLLFTTFAVFAPLSCFKRIDSLRYTSALSFGLAVAFLVIAVGISIFKIAIGGIGMPRLFPIITDVASVFELFTVTPVVVTAYLCHFNVHSIDNELEDSSQIHGIVRTSLTLCASVYLLTSFFGFLLFGEGTLDDVLANFDSDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFPSSRPLVLDNFRFASITMALIVASFLGANFIPSIWDIFQFTGATAAASLSFIFPSAITLRDRYNIGTKKDKILSVFMIVLAVFANVVAVYSDAFALIKNSTTKRE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00352 464 Pfam Transmembrane amino acid transporter protein 46 448 IPR013057 -
Gma19g00352 464 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Gma19g00352 464 PANTHER AMINO ACID TRANSPORTER 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00352 Gma-Chr19 5333324 5338216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00352 21 460 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.443 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00352 K14207 - gmx:100785277 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00352 19 5333324 5338216 Gma18g02507 18 59160388 59164179 PCT
Gma19g00352 19 5333324 5338216 Gma08g02351 08 22919968 22923277 PCT
Gma18g02507 18 59160388 59164179 Gma19g00352 19 5333324 5338216 PCT
Gma08g02351 08 22919968 22923277 Gma19g00352 19 5333324 5338216 PCT