Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00344 ATGGTTCGCCAAGCTGATTTAGTCATCATTGGTGTTTCTGTTGGTTTGACCCTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGGTGGTACAAGAAACGTGCTCATATTAGACGATCTGCAAATGAGTCTAGTTTAACAACTCTGCCGATACGAACAAATGGATTGGGAACAAGTAGTGACTTTAGTGCATCTCTTGATAGTTCCATAGCCTCATCATGGTCAGAAAATCTAAAGAGAAATTCCCATTTTAGTTGGTGGAATCATCAAAATAAAGATCGGTTTGCTTCAGCATCAGGCATTCTTAAGTATTTGTACAAAGAAATTCAAAAGGCCACACAAAATTTCACAACTACTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCGACAATGCCTACAGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCCAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGACTGcatcaccggaatcttgtgaatttggttggatattgtgtagataaaggacaacgcatactggtttatcaatacatgagtaatggaagtttagcgaatcttTTATATGGTGAAGAAAAGGAATTGAGTTGGGATCAAAGGCTGCAAATTGCTCTTGATATTTCACACGGAATAGAATACCTTCATGAAGGAGCAGTCCCACCTGTCATACACCGTGATTTAAAGTCTGCCAACATATTGCTAGATCACTCTATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGATCTTTGATGACCGGAATTCTGGTCTCAAAGGTACATATGGCTACATGGATCCTGCATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTCGGTATCATAGTGTTTGAGCTAATCACTGCCATCCACCCACATCAGAATTTGATGGAATATGTTAACCTTGCTGCAATGGATCATGATGGTGTAGATGAGATACTTGACAAGCAACTGGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAGCTTGCTAAAATTGGACACAAATGCTTACACAAATCACCTAGGAAACGCCCCTCTATAGGTGAAGTTTCTCAGTTCATATCAAGAATAAAGCAAAGGCGACAGCGCCATCTAACAGAAGATAACTTGTCATTTGCAAGCAATAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTAAGTAGGATGCCAACCATTAACCTCACAGAAACTGTATAA 1275 0.3725 MVRQADLVIIGVSVGLTLGILISCLIFFGIRWYKKRAHIRRSANESSLTTLPIRTNGLGTSSDFSASLDSSIASSWSENLKRNSHFSWWNHQNKDRFASASGILKYLYKEIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSNGSLANLLYGEEKELSWDQRLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDDRNSGLKGTYGYMDPAYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKIGHKCLHKSPRKRPSIGEVSQFISRIKQRRQRHLTEDNLSFASNNFSRAVSRLEDRQVELSRMPTINLTETV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00344 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Gma19g00344 424 SMART serkin_6 116 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00344 424 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Gma19g00344 424 PANTHER OS01G0750732 PROTEIN 9 419 - -
Gma19g00344 424 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Gma19g00344 424 SUPERFAMILY Protein kinase-like (PK-like) 88 373 IPR011009 -
Gma19g00344 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 419 - -
Gma19g00344 424 CDD STKc_IRAK 122 378 - -
Gma19g00344 424 Gene3D Phosphorylase Kinase; domain 1 79 191 - -
Gma19g00344 424 Gene3D Transferase(Phosphotransferase) domain 1 192 401 - -
Gma19g00344 424 ProSiteProfiles Protein kinase domain profile. 116 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00344 424 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00344 Gma-Chr19 5163051 5168996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00344 102 375 Receptor kinase-like Gene Family AT3G19300 42.403 1.16e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma19g00344 PK_Tyr_Ser-Thr 6.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00344 - - gmx:100819995 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02496 18 59067761 59072679 Gma19g00344 19 5163051 5168996 PCT
Gma08g02342 08 22738333 22743291 Gma19g00344 19 5163051 5168996 PCT