Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00332 ATGAATCATCTAATGAACAAGTCCATAGACTTCATACATGAATCATCTAATGATAAAGGAGGAAGCCCTTATATAACTGCTTCTGATTCCAAGTATGTCGAAACTCTTGACAAGTTCAGTTCTTGTTACCCTGTGTCTGCTGATGCAGCACTCAAGAAACCATTCAGTGTTGAGTATAAATGGAAAAAGAAACGTTCTGGGGACTTGCTCATGCTGGCTCACCCTCTTCATGCTAAGCTTCTGTCATATGATCATGATGTTACTATGCTGAATGATTTTAAGTATAGAAGCATTGATGGTGACCTTGTTGGTGTTGTTGGAGATTCATGGGTGTTGGAAACCAATCCTATTCCAGTGACATGGAATTCTAACAAAGGTGTGGAGAAAGAGTCTTATGGCGAGATTGTCACGACGCTTTTTAAGGATGTTCAAGCGCTGAATTCTTCAGCAATAGGAACAAATTCATCTTATTTCTATGAGAAGCAGGTTGGAAGGGCTGCGAGaaccatgaatacttgcaagaagtcccctttgaagccatGGAAGAAAGGGCCAACAAGGGGGAAAGGCGGGCCCCAGAACGCCTCCTGCGAGTACCGAGGCGTTCGGCACCGAACTTGGGGCAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAGAGAACCAGGCTCTGGCTTGGTTCTTTTGCCACAGCTAAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGTCCAGATGCATACCTTAATCTCCCCCACCTGCAACCCAGGCTACAAGAGCTTAAGCGAAATTCAGTTGTGAGTCAATCCTCATCTAGTTCATCCAATGATCCAATGGCAGAAATTCAGAATGTAGATAGCAAAAATCACGGAGAAGATGAAAATCCTCCAAAAGATGTTCAAACATCATCAGAGGAGGTGCTTGGAGATCTTCAGGAGAAACCCCAGATAGACCTCCATGAGTTTCTTCAACAGATGGGAATACTTAAAGAAGAAAGACAGTTAGAAAGAACTGATAGCTCAGGAAGTTCAACAGTGCGTGAAGCTGTGTTGACAAATGACTGTGATCATTTGGGTGGGTTTTCTGACAAGAGTGTAAATAGGGAGGCATTGATTGAGATGCATGGACTTGCAGGTATTCAGGAATCAGAAGTCACTCAGCTTGAAGCATATGAGCCAAATGATGATCTAACTTTCTCAACTTCCAGTTGGAACTTTTAA 1230 0.4195 MNHLMNKSIDFIHESSNDKGGSPYITASDSKYVETLDKFSSCYPVSADAALKKPFSVEYKWKKKRSGDLLMLAHPLHAKLLSYDHDVTMLNDFKYRSIDGDLVGVVGDSWVLETNPIPVTWNSNKGVEKESYGEIVTTLFKDVQALNSSAIGTNSSYFYEKQVGRAARTMNTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRHRTWGKWVAEIREPKKRTRLWLGSFATAKEAAMAYDEAARRLYGPDAYLNLPHLQPRLQELKRNSVVSQSSSSSSNDPMAEIQNVDSKNHGEDENPPKDVQTSSEEVLGDLQEKPQIDLHEFLQQMGILKEERQLERTDSSGSSTVREAVLTNDCDHLGGFSDKSVNREALIEMHGLAGIQESEVTQLEAYEPNDDLTFSTSSWNF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00332 409 CDD AP2 197 257 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 Gene3D AP2/ERF domain 198 256 IPR036955 GO:0003700|GO:0006355
Gma19g00332 409 PRINTS Ethylene responsive element binding protein signature 221 237 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 PRINTS Ethylene responsive element binding protein signature 199 210 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 Pfam Glycosyl hydrolase family 81 N-terminal domain 27 122 IPR040451 -
Gma19g00332 409 SUPERFAMILY DNA-binding domain 198 256 IPR016177 GO:0003677
Gma19g00332 409 Pfam AP2 domain 197 247 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 MobiDBLite consensus disorder prediction 266 309 - -
Gma19g00332 409 MobiDBLite consensus disorder prediction 266 286 - -
Gma19g00332 409 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 258 406 - -
Gma19g00332 409 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 170 257 - -
Gma19g00332 409 MobiDBLite consensus disorder prediction 289 303 - -
Gma19g00332 409 MobiDBLite consensus disorder prediction 175 197 - -
Gma19g00332 409 ProSiteProfiles AP2/ERF domain profile. 198 255 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 SMART rav1_2 198 261 IPR001471 GO:0003700|GO:0006355
Gma19g00332 409 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 258 406 - -
Gma19g00332 409 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 170 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00332 Gma-Chr19 4712209 4715214 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00332 174 409 AP2-EREBP Transcription Factor Family AT3G57600 42.545 8.81e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g00332 Glyco_hydro_81 1.6e-20 CL0103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00332 - - gmx:100801311 429.483