Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00329 atggatacttgcaagaagtcccctttgaagccatGGAAGAAAGGGCCAACAAGGGGGAAAGGCGGGCCCCAGAACGCCTGCTGTGAGTACCGAGGCGTTCGACAGCAAACTTGGGGCAAATGGCTTGGTTCTTTTGCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGTCCAGATGCATACCTTAATCTCCCCCACCTGCAACCCAGGTCCACTTCAACTATCACGTTAGGAAAGTTAAAATGGTTCCCTTCCAAGAACTTCATTTCAATGTTTTCTTCCTATGGATTACTCAATGTAAATGCTCAACCTAGTGTTCATTTAATCCATCAGAGGCTGCAAGAGCTTAAGCGAAATTCAGTTGTGAGTCAATCCTCATCTAGTTCATCCGATGATCCAAAGGCAGAAATTCAGAATGTAGACAGCAAAAATCACGGAGAAGATGAAAATCCTCCAAAAGATGTTCAAACATCATCAGAGGAG 504 0.4246 MDTCKKSPLKPWKKGPTRGKGGPQNACCEYRGVRQQTWGKWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHLQPRSTSTITLGKLKWFPSKNFISMFSSYGLLNVNAQPSVHLIHQRLQELKRNSVVSQSSSSSSDDPKAEIQNVDSKNHGEDENPPKDVQTSSEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00329 168 MobiDBLite consensus disorder prediction 143 168 - -
Gma19g00329 168 MobiDBLite consensus disorder prediction 1 24 - -
Gma19g00329 168 CDD AP2 28 74 IPR001471 GO:0003700|GO:0006355
Gma19g00329 168 MobiDBLite consensus disorder prediction 126 168 - -
Gma19g00329 168 SMART rav1_2 29 78 IPR001471 GO:0003700|GO:0006355
Gma19g00329 168 MobiDBLite consensus disorder prediction 126 142 - -
Gma19g00329 168 SUPERFAMILY DNA-binding domain 29 73 IPR016177 GO:0003677
Gma19g00329 168 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 167 - -
Gma19g00329 168 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 167 - -
Gma19g00329 168 ProSiteProfiles AP2/ERF domain profile. 29 72 IPR001471 GO:0003700|GO:0006355
Gma19g00329 168 Gene3D AP2/ERF domain 40 73 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00329 Gma-Chr19 4662150 4662695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00329 5 129 AP2-EREBP Transcription Factor Family AT3G57600 62.857 1.18e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00329 - - gmx:100801311 301.212