Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00327 ATGAAGTCGTATCGACCTTCCGCCAACGCCAGGACCGAGGTTCGTCGGAACAACTACAAGGTCGTCGTGGACGCCGATGAAGGTCGTCGACGCGGAGAGGATACCATGGTGGAGATTCGAAAGAACCGTAGGGAAGAGAGTTTGCAGAAGAAGAGATGCGAGGGTCTCCAATTCCAGCAGATTCCTTCGTCACTTCTCTCTACTGTAATTGAGAAGAAGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTGGATGCTGATGCAGGTCAGAATAAAAGAAAAATTAAAGCTTTCATCGGAGGTCTTGATTTATGTGTGGGCCGATATGATACCCCAAACCATTCCATCTTTAGGACTTTGCAGACAACACACAAAGATGACTATCATAATCCTAACTTTGAGGGGCCAGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCCAAGTTGATGGTCCAGCAACATATGACATTCTCACCAATTTTGAGGAGCGTTGGTTAAGGGCATTAAAAATGCATAGATATCAAAAGATGAGAAGTTCACATGATGATTCATTACTGAAAATTGATAGAATCCCTGACATTGTTGGCATTGATGAAGTTCCTTGCCAGAATGAAAATAACCGGGAGACTTGGCATGTCCAGGTCTTCCGTTCAATTGATTATAATTCTGTGAAAGGATTTCCAAAGGAACCACAAGATGCTATAAGAAGGAACTTGGTTTGTGGAAAGAATGTACTGATAGACATGAGCATACATTCAGCAATGACATTGCTTTTGGGCCCTCCATGTTCCGGAAAAACCACCCTCTTGTTGGTCTTGGGTGCAAAACTTGATCCAAAATTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCGTGGGATGGATGAGTTTGTACCCCAAAAAACTGCTGCTTATGCCAATCAAAATGATCTTCATGTTGCAGAGTTGACAGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCGTTATGATTTGCTTGCAGAATTGTCCAGAAGAGAAAAAGAGACAAATATCAAGCCTAATCAAGATATTGATGTCTACATGAAGATTTTAGGACTGGAGGTCTGTGCTGATACTATTGTACGAAATGCAATGTTAAGGGGGATATCTGGTGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTGGTTGGACCAACTAATGCTTTATTCATGGATGAAATATCTATTGGGGTCAGAAAGACTTTGAATTCAGAGTTATGGCATGCTTTTGCAGGGCTTCTTGTGTCATTACCCCAAGTTGGGAGTCTTGTGTTTTACTTCCCTCAGGGACATAGTGAGCAGGTGGCAGCTTCTACTAGAAGAACAACAACATCACAGATTCCAAACTACCCCAATCTTCCATATCAGTTGCTGTGTCAAGTTCAAAATGTCACACTTCATGTGAGTGTTGGGTGCTGGTTGACTTGA 1488 0.4261 MKSYRPSANARTEVRRNNYKVVVDADEGRRRGEDTMVEIRKNRREESLQKKRCEGLQFQQIPSSLLSTVIEKKEAGTIYTHHQKTVIVDADAGQNKRKIKAFIGGLDLCVGRYDTPNHSIFRTLQTTHKDDYHNPNFEGPVTGCPRQPWHDLHSQVDGPATYDILTNFEERWLRALKMHRYQKMRSSHDDSLLKIDRIPDIVGIDEVPCQNENNRETWHVQVFRSIDYNSVKGFPKEPQDAIRRNLVCGKNVLIDMSIHSAMTLLLGPPCSGKTTLLLVLGAKLDPKLKFSGKVTYNGRGMDEFVPQKTAAYANQNDLHVAELTVRETLAFSARVQGVGTRYDLLAELSRREKETNIKPNQDIDVYMKILGLEVCADTIVRNAMLRGISGGQRKRVTTGEMLVGPTNALFMDEISIGVRKTLNSELWHAFAGLLVSLPQVGSLVFYFPQGHSEQVAASTRRTTTSQIPNYPNLPYQLLCQVQNVTLHVSVGCWLT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00327 495 Pfam ABC transporter 260 413 IPR003439 GO:0005524
Gma19g00327 495 Pfam Phospholipase D Active site motif 78 112 IPR001736 GO:0003824
Gma19g00327 495 Gene3D - 249 442 IPR027417 -
Gma19g00327 495 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 67 262 - -
Gma19g00327 495 SUPERFAMILY Phospholipase D/nuclease 77 178 - -
Gma19g00327 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 431 IPR027417 -
Gma19g00327 495 PANTHER PHOSPHOLIPASE D 67 262 IPR015679 -
Gma19g00327 495 Gene3D Endonuclease Chain A 8 197 - -
Gma19g00327 495 Pfam Importin beta binding domain 15 56 IPR002652 GO:0006606|GO:0061608
Gma19g00327 495 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 77 112 IPR001736 GO:0003824
Gma19g00327 495 ProSiteProfiles IBB domain profile. 1 61 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00327 Gma-Chr19 4647800 4652394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00327 70 261 Phospholipase D Gene Family (Wang group) AT4G00240 68.750 2.30e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00327 K01115 - gmx:121174169 468.003