Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00326 ATGGGTTCTGTTTGTTGTTGTTTGAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTCAAGGGGCAGCATCTATAACTTCAGCAGCATCACTCGATAATTCACTATCTGACATGTACCGCTCTCCTCCAAGGCCATTACCATATGATGCAGAACCCAGATATTTTCGCTCACAACGTGATGGACTAGTTTCAAGGCGTGAGAAGGGTTCAAGTCATTCAAATGAGGAAACAGAACCTCTAAGAAGTGATGCAGATCTGGATCCAGAGTCTTTAAATTCAGGAGACAAATGGAATGAAAGTGCCTGTGAAGCTGGGTCAAAGGAATACCATTCTAAGTCCTCCCTAAGACTTCAATCAACAAAATATTCAACTGGAGTGGGCCTTGTCTATGCATCATCAGAGGAGGAGGATGTTTGTCCAACTTGTCTTGAAGAATACACTAAAGAGAATCCAAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACAACTGTCCAGTTTGTGGAAAGGTGATGGTATTCGATGAAACGACTTTCACTTGA 690 0.4072 MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLSVYSSIFRRGDAHSIPSSIQGAASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETEPLRSDADLDPESLNSGDKWNESACEAGSKEYHSKSSLRLQSTKYSTGVGLVYASSEEEDVCPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETTFT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00326 229 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Gma19g00326 229 MobiDBLite consensus disorder prediction 99 135 - -
Gma19g00326 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 226 - -
Gma19g00326 229 SMART ring_2 177 217 IPR001841 -
Gma19g00326 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 224 IPR013083 -
Gma19g00326 229 SUPERFAMILY RING/U-box 172 224 - -
Gma19g00326 229 MobiDBLite consensus disorder prediction 99 130 - -
Gma19g00326 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 226 - -
Gma19g00326 229 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00326 Gma-Chr19 4591537 4596053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00326 1 226 C3H Transcription Factor Family AT5G15790 61.905 1.42e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00326 - - gmx:100777068 481.1