Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00315 ATGTTTTTCCGTTTCAGCTCCCCCTTCGCGATCCGATCCTTCCTCAAATCCCCTCCATGCATTCTGCTTTTCGTTCTCTTCTCTTTCACAGAAGCTTATGATCCACTTGATCCATATGGAAATATCACAATCAAATGGGATATCATAAGTTGGACCCCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTTCAACAATATCGCCATATCTCGGAGCCTGGGTGGTCGCTTGGATGGACATGGGCGAAGAAGGAGGTAATATGGAGCATGGTGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAAGGAAACATCCCACATTGCTGTAAAAAGAACCCTGTAGTTGTCGATTTACTTCCCGGAACACCTTACAACCAACAAATTGCAAACTGCTGCAAAGGCGGTGTACTCAGCTCGTGGGCACAGGATCAATCCAAGGCGGTTTCAGCATTTCAAGTCAGTGTGGGTAGTGCTGGTACCACTAACAAAACTGTCAAACTGCCAAAAGACTTCACACTGAAAGCGCCAGGACCCGGTTACACATGTGGGCCGGCAACAATTGTGAAACCAACTCTATTTATACAACCAGACAAAAGGAGAGTGACACAAGCACTCATGACATGGAATGTAACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCAGTTGCTGCGTCTCGCTTTCATCTTTCTATAACGATACTGTTGTACCCTGCACTACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAATTAGGGGAATGTGTAGATCCGGACTCGTCACCACATTTGCAATCAGTTGTTTCCAACCCTGGACCTGGAAAGAGTAGTATTACACCTTTGGTTCGATGTACTCGTCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTCAAGGTCACTGTTACTAATTTCAATTACGGGATGAATTATTCTAATTGGAATTTGGTTGTTCAACATCCAAATTTCGACAATCTGACCCAACTTTTCAGTTTCAACTACAAATCAATTACTCCCTACGGATCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAATCAGAACTACTATTCAGAAAGGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGCGACGTTTGTGTGATGCCGCCACCCGATTCTTATCCATGGTTACCTAATGCTGGTTCCAAGCAAGAGGTTTCCCTGCTTGCTTTGGTGATGTCCTCTTTGGTAGCCTTGGTATTATATGCATATGCTTAA 1365 0.4388 MFFRFSSPFAIRSFLKSPPCILLFVLFSFTEAYDPLDPYGNITIKWDIISWTPDGYVAVVTMNNFQQYRHISEPGWSLGWTWAKKEVIWSMVGGQTTEQGDCSKYKGNIPHCCKKNPVVVDLLPGTPYNQQIANCCKGGVLSSWAQDQSKAVSAFQVSVGSAGTTNKTVKLPKDFTLKAPGPGYTCGPATIVKPTLFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPSCCVSLSSFYNDTVVPCTTCACGCQGNSSQLGECVDPDSSPHLQSVVSNPGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYGMNYSNWNLVVQHPNFDNLTQLFSFNYKSITPYGSINDTAMLWGVKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDSYPWLPNAGSKQEVSLLALVMSSLVALVLYAYA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00315 454 PIRSF COBRA 8 454 IPR006918 GO:0010215|GO:0031225
Gma19g00315 454 PANTHER COBRA-LIKE PROTEIN 16 453 - -
Gma19g00315 454 PANTHER PROTEIN COBRA 16 453 IPR006918 GO:0010215|GO:0031225
Gma19g00315 454 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00315 Gma-Chr19 4354491 4358891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00315 14 452 COBRA Gene Family AT3G02210 73.529 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00315 - - gmx:100815926 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00383 13 15783072 15787098 Gma19g00315 19 4354491 4358891 GST
Gma19g00315 19 4354491 4358891 Gma18g02471 18 58779558 58783009 PCT
Gma19g00315 19 4354491 4358891 Gma08g02307 08 22239024 22260755 PCT
Gma18g02472 18 58789363 58792650 Gma19g00315 19 4354491 4358891 PCT
Gma08g02308 08 22271886 22275072 Gma19g00315 19 4354491 4358891 PCT