Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00313 ATGGCCTCCTCCGAGATTAACTGGGACAGGCTAGATAAAAAGAAGTTCTTTGTTGTGGGAGCAGGACTCTTCACGGGTGTTACAGCGGCACTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCCTCAAAGGATACTTTGGAGAGAAGTGCGTTTTCTGTTGTGAAAGGTTTACTTAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTACAGTTATCATTGGAGCGATTCCTACCAGAATCATATTCCTCACTGCCTTAGAGACAACCAAGGTGGCTTCCTTCAGGGTGGTGGAGCCGTTTAGACTATCTGAAACTACTCAGGCTGCCATAGCAAATGGAATTGCAGGCATGGCATCATCATTTTTGTCACAAACTCTATTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATTATCAGGCCATGCCCAATATAGTGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATCAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTACCATCTAATGTTGTATGGTGGGCAAGCTATGGTTCAAGTCAACGCTACTTATGGAGATTCTTGGGAGATAACAGTGAGGAATATACTCCTAGTCTACCAAAGATTATTTTTGCTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAAACCCATTGGATACTATCAAGACACGATTACAGGTGCTGGGACTTGAAAAGAAAATCCCTGTAAAACAAGTTGTTAAAGATTTGATCGCTGAGGATGGTTGGAAAGGTGTATATAGAGGATTAGGTCCAAGACTTTTCAGCACGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGATGGAGGAGGCAATTGA 936 0.4359 MASSEINWDRLDKKKFFVVGAGLFTGVTAALYPVSVVKTRLQVASKDTLERSAFSVVKGLLKTDGIPGLYKGFGTVIIGAIPTRIIFLTALETTKVASFRVVEPFRLSETTQAAIANGIAGMASSFLSQTLFVPIDVVSQKLMVQGLSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSNVVWWASYGSSQRYLWRFLGDNSEEYTPSLPKIIFAQATGGIIAGATASCITNPLDTIKTRLQVLGLEKKIPVKQVVKDLIAEDGWKGVYRGLGPRLFSTSAWGTSMILAYEYLKRLCAKDGGGN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00313 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Gma19g00313 311 SUPERFAMILY Mitochondrial carrier 9 300 IPR023395 -
Gma19g00313 311 Pfam Mitochondrial carrier protein 221 306 IPR018108 -
Gma19g00313 311 Pfam Mitochondrial carrier protein 114 202 IPR018108 -
Gma19g00313 311 Pfam Mitochondrial carrier protein 21 95 IPR018108 -
Gma19g00313 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 97 IPR018108 -
Gma19g00313 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Gma19g00313 311 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Gma19g00313 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Gma19g00313 311 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Gma19g00313 311 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 309 - -
Gma19g00313 311 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 309 - -
Gma19g00313 311 Gene3D Mitochondrial carrier domain 15 308 IPR023395 -
Gma19g00313 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 303 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00313 Gma-Chr19 4336777 4341877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00313 6 305 Chloroplast and Mitochondria Gene Families AT5G15640 73.684 4.99e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00313 K15121 - gmx:100814858 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00384 13 15788625 15794403 Gma19g00313 19 4336777 4341877 GST
Gma19g00313 19 4336777 4341877 Gma18g02470 18 58773309 58777900 PCT
Gma19g00313 19 4336777 4341877 Gma08g02306 08 22230742 22235589 PCT
Gma18g02470 18 58773309 58777900 Gma19g00313 19 4336777 4341877 PCT
Gma08g02306 08 22230742 22235589 Gma19g00313 19 4336777 4341877 PCT