Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00285 ATGGCCGATGATGGAGCAACCTTGACAAGGATGAGCCAGAGAAAGGCGTCATGGAGAGATAGAGAAAACAACAAGAGAAGAGAACGGAGGAGAAGAGCAATAGCGGCGAAAATATACTCTGGACTTCAAGCTCAAGGGAACTTCAACTTGCCAAAGCACCACGACAACAACAAAACTCTGAAAGCTCTCTGCACAAAAGCTGGTTGGTGCGTCAAAGAAGCTTGGCTACGGGTGGATGGTGGTGGCACGGTGGAGAAGGAGAAGAAGAGGATGATGTGA 279 0.4875 MADDGATLTRMSQRKASWRDRENNKRRERRRRAIAAKIYSGLQAQGNFNLPKHHDNNKTLKALCTKAGWCVKEAWLRVDGGGTVEKEKKRMM 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00285 92 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 73 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gma19g00285 92 MobiDBLite consensus disorder prediction 1 28 - -
Gma19g00285 92 MobiDBLite consensus disorder prediction 14 28 - -
Gma19g00285 92 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 73 - -
Gma19g00285 92 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 73 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00285 Gma-Chr19 3837694 3837972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00285 13 73 BZR Transcription Factor Family AT1G19350 75.410 2.44e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gma19g00285 BES1_N 5.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00285 K14503 - gmx:100785743 101.679