Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00227 ATGGAGCTTCGAGTTCCGGTGGAGGTGGAAGTGTCGTTGTTTGATTCCGCTTGGACATGTACCACTGTCTCATGGACTTTTCGGGGATTTTATGAGAAGACACTTCTTGATTATGAAAGACATAAAATAAAAGGTGGTGAGCTGAATGTTCCTGTTGCTTCTCATCCAGAGCCTATAAATATTGAAAATCAGGTCCATGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTGAACATCCCAACAATCCTTAG 264 0.447 MELRVPVEVEVSLFDSAWTCTTVSWTFRGFYEKTLLDYERHKIKGGELNVPVASHPEPINIENQVHVQSDPAGRLVISGEPEHPNNP 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00227 87 SUPERFAMILY ARID-like 15 55 IPR036431 GO:0003677
Gma19g00227 87 PANTHER BNAC07G06470D PROTEIN 17 64 - -
Gma19g00227 87 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 17 64 IPR045147 GO:0006357
Gma19g00227 87 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 65 87 IPR045147 GO:0006357
Gma19g00227 87 PANTHER BNAC07G06470D PROTEIN 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00227 Gma-Chr19 3110238 3112295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00227 58 87 ARID Transcription Factor Family AT1G76510 60.000 7.45e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00227 - - gmx:100781627 101.293