Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00215 ATGTATATTGCATGCTACAAAACGGACAATTTAGGATCTTCCTCATTGGTCTATACATTTTATGTTGTTAATCAAATTTGCTTTGCTATCTTATATTTTCCATCTAAATCAACAGGAAGAAATGTTACAAATGATTTGGTTAGACACCAACCAGTTACTCAAAGATCCTTATCCACCAAAAGGTCAAAAAGATCCTCAGCCACCAACTTAAGCCAGGAAATAATCCAAGTTTCTTCCCTTCTTCGAAGATTCACCTTTAATGATCTTAGGTTGGCCACAAGAAATTTTGAGTCTAAGAATCTTCTTGGTGAGGGGGGGTTTGGAACTGTGTTGAAAGGTTGGGTCAATGAGCATGAGAACGTTGCAGCACGACCTGGAACAGGGACTCCAGTTGCAGTGAAGACTCTCAACCCAAATGGATTTCAAGGTCATAAAGAATGGCTTGCTGAAATTAATTATCTTAGTGAGCTGAGCTCCATCATCCAAATCTGGTTAGATTGGTTGGCTATTGCATCGAAGATGCTAAAAGGTTACTAG 537 0.3892 MYIACYKTDNLGSSSLVYTFYVVNQICFAILYFPSKSTGRNVTNDLVRHQPVTQRSLSTKRSKRSSATNLSQEIIQVSSLLRRFTFNDLRLATRNFESKNLLGEGGFGTVLKGWVNEHENVAARPGTGTPVAVKTLNPNGFQGHKEWLAEINYLSELSSIIQIWLDWLAIASKMLKGY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00215 178 Gene3D Phosphorylase Kinase; domain 1 80 162 - -
Gma19g00215 178 ProSitePatterns Protein kinases ATP-binding region signature. 102 134 IPR017441 GO:0005524
Gma19g00215 178 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX7-RELATED 41 157 - -
Gma19g00215 178 SUPERFAMILY Protein kinase-like (PK-like) 64 157 IPR011009 -
Gma19g00215 178 PANTHER OS01G0588500 PROTEIN-RELATED 41 157 - -
Gma19g00215 178 ProSiteProfiles Protein kinase domain profile. 96 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00215 Gma-Chr19 2782703 2783899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00215 27 157 Glycoside Hydrolase AT3G07070 34.783 4.36e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma19g00215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00215 - - gmx:106797403 354.755