Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00208 ATGGAGACCACAAGTGGTGCTGGTAATAGGATTGGTTATAGGAGTGCAAGAAGATTCAAGGGGGAGAGAAATAAAGATGTCACCTACGAAGAAGGCTCAAATTTTTTGAAGAAATTGAAGATTTTCCTAGGCTGCATGTTTTTTAGTTCAAAACAGGAAGACTCGAGGAGTGACAAGAGCAGACAGGGAAGAAATGTTACAAATGATTTGGTTAGACACCAACCAGTTACCCAAAGATCCTTATCCACCAAAAGGTCAAAAAGATCCTCAGCCACCAACTTAAGCCAGGAAATAATCCAAGCTTCTTCCCTTCGAAGATTCACCTTTAATGATCTTAAGTTGGCAACAAGAAATTTTGAGTCTAAGAATCTTCTTGGTGAGGGGGGTTTTGGAACTGTGTTGAAAGGTTGGGTCAATGAGCATGAGAACTTTGCAGCACGACCTGGAACAGGGACTCCAGTTGCAGTGAAGACTCTCAACCCAAATGGATTTCAAGGTCATAAAGAATGGCTTGCTGAAATTAATTATCTTAGTGAGCTCCATCATCCAAATCTGGTTAGATTGGTTGGCTATTGCATCGAAGATGCTAAAAGGTTACTAGTATATGAGTATATGTCTCAAGGAAGCTTAGACAACCATTTGTTCAAGACGGCAACTAAGCACCTTACATGGCCTATCAGAATGAAAATTGCAATTGGTGCTGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGGCCAGTAATATTCCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGGACTACAATGCAAAACTTTCTGACTTTGGGCTTGCCCAAGATGCTCCAGTGGGAGATAAAACTCATGTTTCCACTGAAGTAATGGGAACACAAGGCTATGCAGCCCCTGAGTATGTGATGACGGGACACCTTACTTCCAAGAgtgatgtctatagctttggggtggttctacttgaaatgctgacaggaAGAAGAGCCGTGGATCAAAGAGTTCCTAGGAAGGAGCAAAACTTGGTGGAATGGTTGCGTCCTCGTCTTAGGGAGAAAGATAATTTTCACTATCTAATGGATCCAAGACTTGGAGGTCAATACCCAATGAAAAGTGCTCGTAGGGCATTGTGGTTGGCCACTCACTGTATTCGTCATAACCCTAAATCAAGACCCCTTATGAGTGAAGTGGTTCGTGAGTTGAAATCTTTGCCTCTTTTTCGTGATGATGATGACATGGTTTCTCAACCTGGTCCCACAACTTCATCAGTTTCCTCAGTCTCAATTCCCTCAACCTCACTTCAAAGATTGGATGTAGGCCCCTCCAACCATGGTGGTGCGAACAAGTATGGCCTCAGAACAGGTCAATCACCATACGTTCGAAGGCACTTTCAAGCCTATCCTCTACCTCTTCCAAATCCTGGTGTTGGATCTTCATCCAATCCTACTGTTGCATCTTTGTCCAATGTAGTAGTTAACCCTAGTGTTCGACAACCGATCTAA 1500 0.4147 METTSGAGNRIGYRSARRFKGERNKDVTYEEGSNFLKKLKIFLGCMFFSSKQEDSRSDKSRQGRNVTNDLVRHQPVTQRSLSTKRSKRSSATNLSQEIIQASSLRRFTFNDLKLATRNFESKNLLGEGGFGTVLKGWVNEHENFAARPGTGTPVAVKTLNPNGFQGHKEWLAEINYLSELHHPNLVRLVGYCIEDAKRLLVYEYMSQGSLDNHLFKTATKHLTWPIRMKIAIGAANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPVGDKTHVSTEVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDQRVPRKEQNLVEWLRPRLREKDNFHYLMDPRLGGQYPMKSARRALWLATHCIRHNPKSRPLMSEVVRELKSLPLFRDDDDMVSQPGPTTSSVSSVSIPSTSLQRLDVGPSNHGGANKYGLRTGQSPYVRRHFQAYPLPLPNPGVGSSSNPTVASLSNVVVNPSVRQPI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00208 499 ProSiteProfiles Protein kinase domain profile. 119 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00208 499 MobiDBLite consensus disorder prediction 67 89 - -
Gma19g00208 499 PANTHER TYROSINE KINASE FAMILY PROTEIN 71 428 - -
Gma19g00208 499 MobiDBLite consensus disorder prediction 414 438 - -
Gma19g00208 499 MobiDBLite consensus disorder prediction 54 89 - -
Gma19g00208 499 PANTHER OS01G0588500 PROTEIN-RELATED 71 428 - -
Gma19g00208 499 MobiDBLite consensus disorder prediction 408 453 - -
Gma19g00208 499 Gene3D Transferase(Phosphotransferase) domain 1 205 413 - -
Gma19g00208 499 CDD STKc_IRAK 125 403 - -
Gma19g00208 499 ProSitePatterns Protein kinases ATP-binding region signature. 125 157 IPR017441 GO:0005524
Gma19g00208 499 Pfam Protein tyrosine and serine/threonine kinase 121 400 IPR001245 GO:0004672|GO:0006468
Gma19g00208 499 SUPERFAMILY Protein kinase-like (PK-like) 92 400 IPR011009 -
Gma19g00208 499 Gene3D Phosphorylase Kinase; domain 1 89 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00208 Gma-Chr19 2711320 2716138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00208 43 427 Glycoside Hydrolase AT3G07070 44.192 1.18e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma19g00208 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00208 - - gsj:114400414 873.618