Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00185 ATGTTTATTCCCTTTAAATCATCAGGAAGGGAAGTTATAAAAGATAATGTTAGACAACAACCGGTTACTCCAAGATCCTCATCCACCATAAGATTAAGAAGTCGTGGAAGATCATATACTCCCAACCAGGAATTAATTGCAGCTTCTTCCCTTCTTCGAAGGTTCTCCTTTAATGACCTTAAGTTGGCAACGAGTAACTTTAAATATGACAATTTACTTGGTGAAGGGGGGTTTGGATCAGTGTTCAAAGGTTGGGTCGATCAAGATGAGAACTATGCAACAAAGCCTGGAATAGGGATTCCAATTGCAGTGAAGACTCTCAACCTAAATGGATTACAGGGTCATAAGGAATGGCTTGCTGAAATTAGTTATCTAGGTGAACTTCATCATCCAAATTTGGTTAGATTGGTAGGCTTTTGCATTGAGGAAGACAAAAGGCTATTGGTATATCAGTTTATGTGTCGACAAAGCTTAGAGAAGCATCTATTCAAGACAAGAAGTATGCATCTTACGTGGCCAATCAGAATGAAAATTGCAATTGATGCTGCTAATGGCCTTGCATTTTTGCATGAGGAAGCTTCGAGGCGAGTAATATTTCGAGACTTCAAGACATCTAATATCTTATTGGATGAGAACTACAACGCAAAACTTTCCGATTTTGGGCTTGCAAAAGATGCTCCAGTGGGAGATAAAAGCCATGTATCAACAAAAGTGATGGGAACAAAAGGGTATGTAGCCCCTGAGTATATGTTGACAGGACACCTTACTTCCAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTACTTGAAATGCTAACAGGAAGAAGAGCCGTGGAGGAAAGAATGCCTAGGAAGGAACAAAACTTGGTGGAATGGTTGCGCCCTCGTCTTAGGGGGAAAGATGATTTCCGCTATCTGATGGATCCAAGACTTGAAGGTCAATACCCAATGAGAAGTGCTCGTAGGGCAATGTGGTTGGCCACTCATTGTATTCGCCATAACCCTGAATCAAGACCCCTTATGAGTGAAGTGGTTCGTGAGTTGAAGTCTTTGCCTCTTTTTGATGATGATGATGACATGGCTTCTCATCAGCCTGGTCCCTTAGCCTCATCAATACCCTCAACCTCACTTCAGAGACTGCACGTAGGTCCTTCCAACCATGCTGGTTCTAACAAGTATGGCCTCAAAACTGGTCAAGCACCAAATGTTCCAAGGCACTATCAAGCCTCCCCTCGATCTACCTCCTCTAAATCCTGA 1257 0.424 MFIPFKSSGREVIKDNVRQQPVTPRSSSTIRLRSRGRSYTPNQELIAASSLLRRFSFNDLKLATSNFKYDNLLGEGGFGSVFKGWVDQDENYATKPGIGIPIAVKTLNLNGLQGHKEWLAEISYLGELHHPNLVRLVGFCIEEDKRLLVYQFMCRQSLEKHLFKTRSMHLTWPIRMKIAIDAANGLAFLHEEASRRVIFRDFKTSNILLDENYNAKLSDFGLAKDAPVGDKSHVSTKVMGTKGYVAPEYMLTGHLTSKSDVYSFGVVLLEMLTGRRAVEERMPRKEQNLVEWLRPRLRGKDDFRYLMDPRLEGQYPMRSARRAMWLATHCIRHNPESRPLMSEVVRELKSLPLFDDDDDMASHQPGPLASSIPSTSLQRLHVGPSNHAGSNKYGLKTGQAPNVPRHYQASPRSTSSKS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00185 418 PANTHER OS01G0588500 PROTEIN-RELATED 21 382 - -
Gma19g00185 418 MobiDBLite consensus disorder prediction 367 418 - -
Gma19g00185 418 Gene3D Transferase(Phosphotransferase) domain 1 153 362 - -
Gma19g00185 418 ProSitePatterns Protein kinases ATP-binding region signature. 73 105 IPR017441 GO:0005524
Gma19g00185 418 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 382 - -
Gma19g00185 418 CDD STKc_IRAK 73 351 - -
Gma19g00185 418 MobiDBLite consensus disorder prediction 355 418 - -
Gma19g00185 418 ProSiteProfiles Protein kinase domain profile. 67 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00185 418 Gene3D Phosphorylase Kinase; domain 1 27 152 - -
Gma19g00185 418 Pfam Protein tyrosine and serine/threonine kinase 69 348 IPR001245 GO:0004672|GO:0006468
Gma19g00185 418 SUPERFAMILY Protein kinase-like (PK-like) 41 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00185 Gma-Chr19 2244334 2248318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00185 5 356 Glycoside Hydrolase AT3G07070 44.959 5.01e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma19g00185 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00185 - - gmx:100820361 844.728