Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00184 ATGGTTAGACACCAACGAGTTACTCAAAGATCCTCATCCACCAAAAGGTCAAAAAGATCCTCGTCCACCAACTTAAACCAGGAAATAATTGAAGTTTCTTCCCTTCTTCGAAGATTCACCTTTAATGATTTGAAGTTGGCAACTAGGAATTTTGAGTCTAAGAACTTTCTTGGTGTGGGGGGTTTTGGAAACGTGTTGAAAGGTTGGGTCAATGAGCATGGGAACTTTGCAGCACGACCTGGAACGGGGATTCAAGTCGCAGTGAAAACCCTCAACCCAAATGGATTTCAGGGTCACAAGGAATGGCTTgCTGAAATTAGTTACCTTAGTGAGCTTCATCATCCAAATCTGGTTAGGTTGGTTGGCTATTGCATCGAGGATGACAAAAGACTGTTAGTATATGAGTATATGTGTCAAAGAAGCTTAGACAAACATTTGTTCAAGACAGCAACTAAGCACCTTACATGGCCTGTCAGAATTAAAATTGCAATTGGTGCGGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGACCAGTAATATTTCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGGACTACAATGCAAAACTTTCCGACTTTGGGCTTGCGCAAGATGCTCCAATGGGAGATAAAACTCATGTTTCCACTGAAGTAATGGGAACACAAGGCTATGCAGCCCCTGAGTATGTTATGACAGGACACCTTACTTCCAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTACTTGAAATGCTGACAGGAAGAAAAGCCATGGATCAAAGAAGGCCAAGGAAGGAGCAAAACTTGGTGGAATGGTTGCGCCCTCGTCTTAGGGAAAAAGATAATTTCCACTATCTGATGGATCCTAAACTTGAAGGTCAATATCCAATGAAAAGTGCTCGTAGAGTAATGTGGTTGGCCACTCACTGTATTCGCCATAATCCTAAATCAAGACCCCTTATGAGTGAAGTGGTTCGTGAGTTGAAGTCTTTGCCTCTTTTTCATGATGATAATGACATGGTTTCTGATCATCCTTGTCCCACAACCTCATCAGTTTCCTCAATCTCAATTTCCTCAAGCTCACTTAAAAGATTGCATGTTGGCCCCTCCAACCATGGTGGTGCAAACAAGTATGGCCCCAGAACTGGTCAATCACCAAACGTTCCAAGGCACTTTCAAGCTTATCCTCTACCTCTTCCAAATCCTGGTGTTGGATCTTCATCCAATCCTACTGTTGCATCTTCTTCATCCAACCcaagattttaa 1278 0.4225 MVRHQRVTQRSSSTKRSKRSSSTNLNQEIIEVSSLLRRFTFNDLKLATRNFESKNFLGVGGFGNVLKGWVNEHGNFAARPGTGIQVAVKTLNPNGFQGHKEWLAEISYLSELHHPNLVRLVGYCIEDDKRLLVYEYMCQRSLDKHLFKTATKHLTWPVRIKIAIGAANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPMGDKTHVSTEVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRKAMDQRRPRKEQNLVEWLRPRLREKDNFHYLMDPKLEGQYPMKSARRVMWLATHCIRHNPKSRPLMSEVVRELKSLPLFHDDNDMVSDHPCPTTSSVSSISISSSSLKRLHVGPSNHGGANKYGPRTGQSPNVPRHFQAYPLPLPNPGVGSSSNPTVASSSSNPRF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00184 425 MobiDBLite consensus disorder prediction 347 370 - -
Gma19g00184 425 MobiDBLite consensus disorder prediction 346 425 - -
Gma19g00184 425 PANTHER OS01G0588500 PROTEIN-RELATED 9 365 - -
Gma19g00184 425 ProSitePatterns Protein kinases ATP-binding region signature. 57 89 IPR017441 GO:0005524
Gma19g00184 425 Gene3D Transferase(Phosphotransferase) domain 1 137 347 - -
Gma19g00184 425 SUPERFAMILY Protein kinase-like (PK-like) 34 362 IPR011009 -
Gma19g00184 425 MobiDBLite consensus disorder prediction 1 23 - -
Gma19g00184 425 CDD STKc_IRAK 57 335 - -
Gma19g00184 425 PANTHER TYROSINE KINASE FAMILY PROTEIN 9 365 - -
Gma19g00184 425 Gene3D Phosphorylase Kinase; domain 1 8 136 - -
Gma19g00184 425 MobiDBLite consensus disorder prediction 406 425 - -
Gma19g00184 425 Pfam Protein tyrosine and serine/threonine kinase 54 332 IPR001245 GO:0004672|GO:0006468
Gma19g00184 425 ProSiteProfiles Protein kinase domain profile. 51 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00184 Gma-Chr19 2235707 2238906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00184 3 368 Glycoside Hydrolase AT3G07070 45.093 2.21e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma19g00184 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00184 - - gmx:100819830 819.69