Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00173 ATGAGGAGGCTGAAGCTCAAGTTAAAGCAAACGATGGAAATGTACAGTAAAGCATGCAAACAAGCACTTTCATCACAGCAGAAGCGACTTGAGGAAGAAAAAAAATACAAGCTGCGATTGGATCAGGAAGCTGCAATGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAATTGTTGAAGCATCTAAGAAAATTGCGGAGGAAACACAGAGAAGAGCGGGTGCTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGACAATCTAGCCCTAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTACTTTTCTGAACTCCATAAAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTATCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTTCTCAAGGGAAGTCACAGTTTCAGCAAGACCTGAGGTTCCGAATTGCTGCAGAGATAGGGACGCGCTTACTATTCCTGCATCTGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGGAACATTTTGCTGGACCAGAATTATGTGAGTAAGATAAGTGATGTTGGATTGGCAAGGCTTGTTTCGGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAACTGAAACATTTTGTTATATTGATCCCAAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGATGTTTATTCTCTGGGGATCATATTTCTACAATTATTGACAGGAAGGGCTCCAATGGGATTGGCTCACCATGCTGAAGAATCTATAGAGAAGGATAGCTTCGTGCAAATGCTGGACCCATTTATTACTGACTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCCTGACCTTGCCAAACTAGTATTGCCAGAGCTAGATAAATTGAGAGACTTCGCTGAACAAAACATGACCATGACCATGCCCATCATTTTAGGATGCACTGCGCCTTCACCCAGCCACAGTGAACCTTCCGTGCAACAGCGGAACGAGAGTAGCAGTGATATGGCGATAATGGTGTCGGTGGTGATAATAGTGGTGGGATGGAATAGTGGTGGCGACGATGGTGACAGTGATGGTAATGGAATGGTGATGGTGACGATAATAGCGATCTGA 1227 0.4434 MRRLKLKLKQTMEMYSKACKQALSSQQKRLEEEKKYKLRLDQEAAMAIAEKEKARCRAAMEIVEASKKIAEETQRRAGAEVKALKEAEEMRKLLDNLALTDVRYRRYCIEEIEAATNYFSELHKIGEGGYGPVYKCYLDHTPVAVKVLRPDASQGKSQFQQDLRFRIAAEIGTRLLFLHLTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVSAVAENVTQCCMTSATETFCYIDPKYQQTGMLGVKSDVYSLGIIFLQLLTGRAPMGLAHHAEESIEKDSFVQMLDPFITDWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEQNMTMTMPIILGCTAPSPSHSEPSVQQRNESSSDMAIMVSVVIIVVGWNSGGDDGDSDGNGMVMVTIIAI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00173 408 Pfam Protein kinase domain 156 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00173 408 Gene3D Transferase(Phosphotransferase) domain 1 146 354 - -
Gma19g00173 408 SMART serkin_6 119 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00173 408 PANTHER OS02G0152300 PROTEIN 1 162 - -
Gma19g00173 408 PANTHER OS02G0152300 PROTEIN 163 372 - -
Gma19g00173 408 PANTHER BNAA05G18880D PROTEIN 1 162 - -
Gma19g00173 408 Coils Coil 70 90 - -
Gma19g00173 408 ProSiteProfiles Protein kinase domain profile. 34 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00173 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Gma19g00173 408 SUPERFAMILY Protein kinase-like (PK-like) 102 326 IPR011009 -
Gma19g00173 408 PANTHER BNAA05G18880D PROTEIN 163 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00173 Gma-Chr19 2089202 2092506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00173 1 365 Receptor kinase-like Gene Family AT1G78940 52.000 7.88e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma19g00173 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00173 - - gsj:114376387 599.356