Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00171 ATGACATCAATCAAACCTCACGGCTGGGTGGATGAATCTATTGAGTCTCCATTTGTAAGAGGAAGAGGCATGGATGGAATGTCATGCCTGGACTTCCCAGAATCAGATACAGACATATCATTTGTAAGCTCCGAGAGGCCAAGCAGTGGACGTTCATCCTCCGTTTATGACTACATTGACGCAGGCCGAACTTCTCGAGTTTCTACCAGTTCAGATCGTAGCTTTGGATCAACCCGATTGGGGGCACTCAAGTTCAACAACCCTAATTCACCAGATATGCCATTCTCACATGAAAGCAGTACAACATCATTTTCATATTCATTACAGAGCGTGGATGAAGCAGCAGAAGCTGATATGAGGAGGCTGAAGCTCGAGTTAAAGCAAACGATGGAAATGTACACTAAAGCATGCAAACAAGCACTTGCATCACAGCAGAAGCGACTTGAGGAAGAAAAAAAATACAAGCTGCGATTGGATCAGGAAGCTGCAATGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAACCATGGAAATTGTTGAAGCATCTAAGAAAATTGCGGAGGAAACACAGAGAAGAGCGGGTGCTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGACAATCTAGCCCTAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTACTTTTCTGAACTCCAGAAAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTATCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTTCTCAAGGGAAGTCACAGTTTCAGCAAGACGTGATCAACCACTGCATGAGACACCCAAACATGGTGCTTCTTCTAGGAGCGTGTCTGGAGTATGGCATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTAAAAAAAAAAAAAAGAACAAGCGTGTTTTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAAAGATAGGGACGCGCTTACTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGGAACATTTTGCTGGACCAGAATTATGTGAGTAAGATAAGTGATGTTGGATTGGCAAGGCTTGTCCCGGCTGTAGCTGAAAATGTAACACAATGTTGCATGACATCAGCAACTGAAACATTTTGTTATATTGATCCCAAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGATGTTTATTCTTTGGGGATCATATTTCTACAATTATTGACAGGAAGGGCTCCAATGGGATTGGCTCACCATGCTGAAGAGTCTATAGAGAAGGATAGCTTCGTGCAAATGCTGGACCTATCTATTACTGACTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCTTGACCTTGCCAAACTAGTATTCCCAGAGCTAGATAAATTGAGAGACTTCGCTGAACAAAACATGACCATGACCATGACCATGCCCATCATTTTAGGATGCACTGCGCCTTCACCCAGCCACAGTGAACCTTCCGTGCAACAGGATTTGATCAGTGACCTGCAGCTTGCACATTCCGAAAGCTCATCAGCTCCATCAACGCCCACAAAAGGAAAACCTTAA 1689 0.4381 MTSIKPHGWVDESIESPFVRGRGMDGMSCLDFPESDTDISFVSSERPSSGRSSSVYDYIDAGRTSRVSTSSDRSFGSTRLGALKFNNPNSPDMPFSHESSTTSFSYSLQSVDEAAEADMRRLKLELKQTMEMYTKACKQALASQQKRLEEEKKYKLRLDQEAAMAIAEKEKARCRATMEIVEASKKIAEETQRRAGAEVKALKEAEEMRKLLDNLALTDVRYRRYCIEEIEAATNYFSELQKIGEGGYGPVYKCYLDHTPVAVKVLRPDASQGKSQFQQDVINHCMRHPNMVLLLGACLEYGILIYEYMANGSLEDCLFKKKKKNKRVLSWQLRFRIAAKIGTRLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSATETFCYIDPKYQQTGMLGVKSDVYSLGIIFLQLLTGRAPMGLAHHAEESIEKDSFVQMLDLSITDWPLEQALCLAKIAVKCAELRRKDRLDLAKLVFPELDKLRDFAEQNMTMTMTMPIILGCTAPSPSHSEPSVQQDLISDLQLAHSESSSAPSTPTKGKP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00171 562 SMART serkin_6 237 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00171 562 MobiDBLite consensus disorder prediction 526 562 - -
Gma19g00171 562 MobiDBLite consensus disorder prediction 527 562 - -
Gma19g00171 562 Coils Coil 188 208 - -
Gma19g00171 562 PANTHER OS02G0152300 PROTEIN 62 546 - -
Gma19g00171 562 Gene3D Transferase(Phosphotransferase) domain 1 309 521 - -
Gma19g00171 562 Coils Coil 112 132 - -
Gma19g00171 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Gma19g00171 562 ProSiteProfiles Protein kinase domain profile. 237 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00171 562 Gene3D Phosphorylase Kinase; domain 1 206 308 - -
Gma19g00171 562 Pfam Protein kinase domain 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00171 562 PANTHER BNAA05G18880D PROTEIN 62 546 - -
Gma19g00171 562 SUPERFAMILY Protein kinase-like (PK-like) 220 496 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00171 Gma-Chr19 2080959 2083548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00171 12 535 Receptor kinase-like Gene Family AT1G78940 56.434 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma19g00171 Pkinase 8.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00171 - - gsj:114376387 900.968