Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00156 ATGGAACCGCCGTCGAAAGTCAAGATTTTCGATGACATTCGCTTCGAAGACAATCTTGAGTCGTCTTTGAATGTAGTTATGAATCGTCGTGGAATGATGCTTTTGCAcgaggaggcgaagttgaacaatgaatcggacgatttgcagaactctatcagactcactaaggataacatcaaggctatcattatgGACGTGATGTTCGGAGGCACGGAAACGGTAGCGTCAGCGATCGAGTGGGCCATGGCGGAGCTCATGAGAAGCCCAGAAGATCAAAAGCGGGTCCAACAAGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGCCGAAGAGTCCGATTTCGAGAAACTCACTTATCTCAAATGTGCCCTCAAAGAGACCCTCCGCCTCCACCCTCCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGACGCGACGGTCGGCGGTTACCTCGTCCCCAAGAAGGCGCGTGTCATGATCAACGCGTGGGCCATTGGGAGGGACAAGAACAGCTGGGAGGAACCCGAGAGCTTCAAGCCCGCCCGGTTTCTTAAACCGGGCGTGCCCGATTTCAAAGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGCAGGTCCTGCCCCGGGATGGTGTTGGGGCTCTACGCGCTCGAGTTGACGGTGGCGCACCTCCTTCACTGCTTCACGTGGGAATTGCCAGATGGGATGAAGCCAAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAAGATCCACGCGACTCATTGCTGTGCCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAA 816 0.5123 MEPPSKVKIFDDIRFEDNLESSLNVVMNRRGMMLLHEEAKLNNESDDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLDRRAEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEDATVGGYLVPKKARVMINAWAIGRDKNSWEEPESFKPARFLKPGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALELTVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRSTRLIAVPTKRVVCPLF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00156 271 Gene3D Cytochrome P450 20 257 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 SUPERFAMILY Cytochrome P450 44 265 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 201 210 IPR017972 GO:0005506|GO:0016705
Gma19g00156 271 PRINTS P450 superfamily signature 199 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS P450 superfamily signature 69 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS P450 superfamily signature 122 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS P450 superfamily signature 208 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 Pfam Cytochrome P450 44 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 Coils Coil 38 58 - -
Gma19g00156 271 PRINTS E-class P450 group I signature 58 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS E-class P450 group I signature 208 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS E-class P450 group I signature 161 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS E-class P450 group I signature 78 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PRINTS E-class P450 group I signature 198 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma19g00156 271 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 32 271 - -
Gma19g00156 271 PANTHER CYTOCHROME P450 84A1-RELATED 32 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00156 Gma-Chr19 1889137 1892486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00156 32 270 Monolignol Biosynthesis Gene Families AT4G36220 78.243 3.77e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00156 K09755 - gmx:100783430 470.314