Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00149 ATGGATCGCAGCAACACCTTTTCCTCCTCGCTCCTTCTGTTGAGCTTGTTGGGGTTCCACCTCTTCTTTGTTTCGTCGCAGGTCGAAGACGACGTGACATGTCTCAAGGGCATCAAAGAAACCCTCTCCGACCCTCTGAACCGCCTCAGCAACTGGCGCTTCGACAACACAACCGTAGGTTTCATCTGCGATTTTGTCGGCGTGTCTTGCTGGAACCAAAGGGAGAACCGCGTCATAGGTTTGGACCTCCAAGACTTCAAGCTCTCGGGTAAGATCCCCGAGGCTCTAAAATACTGTGGAAATAGCATTCAAAGGTTGGATCTTGCTTCAAATTCTTTCTCTTCGGAGATCCCACATGAGATCTGTACTTGGATGCCGTTTTTGGTTTCTATAGATTTGTCAAGTAACCAGCTTTCTGGGGTTATTCCACCCACAATTGATAACTGTTCATATCTTAATGAGTTGGTGTTGTCGAATAATCAGCTTTCTGGTTCGATTCCATTTGAGTTTGGGAATTTGGGTAGGCTCAAGAAGTTTTCTGTGGCCAATAATAGGCTTACTGGAACAATTCCTGCGTTTTTCAATGGATTTGATAGGGAGGGTTTTGAAGGGAATAGTGGGTTATGTGGGGGTCCTCTTGGAGGAAAGTGTGGTGGGATTAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCATTGTTGCTGGCTTTTGGGTTGTGGTGGTGGTACCATTTGAGTGGGAAGAATAAGAAGAAGGGTTATGGGGTTGGTTCTGGTGGTGTTGGTGGTGGTGGTGGTGGTGATTGGGCTATGAGGTTAAGAGGGTATAAGCTTGTGCAGGTTAGTCTCTTTCAGAAGCCTATTGTGAAGTTGAAGTTGGGGGATTTGATGGCTGCTACTAGTAATTTCAGCGAGGAGAATGTTCTTTTCACAACCAGGACGGGAGCAACGTATAAGGCTGATCTTCCGGATGGGTCTGCACTCGCGGTGAAGCGGTTGAGTGTGTGCAGGATCGGGGAGAAGCAGTTTGGGATGGAGATGAATCGGTTGGGGCAGGTTAGGCACCCGAATTTGGCGCCACTGTTGGGGTACTGTGTTGTGGAGGAGGAGAAGCTGTTGGTCTACAAGCACATGTCGAATGGGACGCTGTATTCGTTGTTGCATAGGAACGGTGGTGATGCGTTGGATTGGTTGATGAGGTTTAGGATTGGGTTGGGTGCGGCGAGGGGGCTTGCGTGGCTGCACCATGGCTGCCACCCTCCGATCATACAGCAGAACATTTGCTCCAGTGTGATTCTTGTTGACGAGGAGTTCGATGCCCGGTTGATGGACTTTGGGCTCGCAAGGCTCATGGCTTCAGACTCGAATGGTAGTTTTGTGAATGGTGATTTGGGGGAGCTCGGGTACATTGCGCCAGAGTATCCTAGTACACTTGTTGCTTCGTTGAAAGGGGATGTGTATGGGTTTGGTATTTTGCTTTTGGAGTTGGTGACTGGGCGAAAACCTCTTGATGTAAGCAATGGGGAGGTAGAGTTCAAGGGTAGCTTGGTGGATTGGGTGAATATGCATTCTAGTTCTGGCCGAATCAAGGATTGCATTGATAAAGCCATATCCGGAAGGGGACACGATGAGGAGATTCTGCAGTTTCTGAAAACTGCAATGAATTGTGTGGTTTCTCGCCCCAAGGATAGATGGTCTATGTACCAGGTTTATCATTCCATAAAGAGCATATCCAAAGAACAGAGTTTCTTTGAACATGATGATGAATTTCCCTTGATCTTTGTGGAGAGTTCTCAGAATCGTGCTAATGTTTATGGTTTGAGCATGTCCATGGGTGACCCTAATCAGGTATAG 1875 0.4757 MDRSNTFSSSLLLLSLLGFHLFFVSSQVEDDVTCLKGIKETLSDPLNRLSNWRFDNTTVGFICDFVGVSCWNQRENRVIGLDLQDFKLSGKIPEALKYCGNSIQRLDLASNSFSSEIPHEICTWMPFLVSIDLSSNQLSGVIPPTIDNCSYLNELVLSNNQLSGSIPFEFGNLGRLKKFSVANNRLTGTIPAFFNGFDREGFEGNSGLCGGPLGGKCGGISKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKNKKKGYGVGSGGVGGGGGGDWAMRLRGYKLVQVSLFQKPIVKLKLGDLMAATSNFSEENVLFTTRTGATYKADLPDGSALAVKRLSVCRIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHRNGGDALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSSVILVDEEFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGILLLELVTGRKPLDVSNGEVEFKGSLVDWVNMHSSSGRIKDCIDKAISGRGHDEEILQFLKTAMNCVVSRPKDRWSMYQVYHSIKSISKEQSFFEHDDEFPLIFVESSQNRANVYGLSMSMGDPNQV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00149 624 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Gma19g00149 624 Gene3D Ribonuclease Inhibitor 28 219 IPR032675 -
Gma19g00149 624 Pfam Leucine rich repeat 128 186 IPR001611 GO:0005515
Gma19g00149 624 SUPERFAMILY L domain-like 27 198 - -
Gma19g00149 624 Gene3D Phosphorylase Kinase; domain 1 272 384 - -
Gma19g00149 624 Gene3D Transferase(Phosphotransferase) domain 1 385 606 - -
Gma19g00149 624 Pfam Protein tyrosine and serine/threonine kinase 333 526 IPR001245 GO:0004672|GO:0006468
Gma19g00149 624 PANTHER OS07G0107800 PROTEIN-RELATED 11 602 - -
Gma19g00149 624 PANTHER - 11 602 - -
Gma19g00149 624 ProSiteProfiles Protein kinase domain profile. 310 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00149 624 SUPERFAMILY Protein kinase-like (PK-like) 287 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00149 Gma-Chr19 1793489 1795464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00149 11 601 Receptor kinase-like Gene Family AT3G28450 62.833 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma19g00149 PK_Tyr_Ser-Thr 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00149 - - gmx:100810378 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00500 13 17444425 17446480 Gma19g00149 19 1793489 1795464 GST