Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00144 GATCAGAACCATATTGGTGTTGACACGAAGAAGAAAAATGGGTCTATTGGGTCCATTTTCATGCATGCTGATGGCCTAGATTGGTTTTTAATGGTTTTGGGTGTCTTTGGAGCCATGGGTGATGGCTTCAGCTCCCCTGTCATGATGTACTTCATTGGCAGAATCGTGAACAATATTGGTGATGTTTCAAAAATCACACCAAGTACTTTCATGCACAACGTCAATAAGGTTCTCTCTCTCTCTCTCTCTCTCCCCCTATTCTTTCTATCTGGTTATTGTTGGACGAGAACAAGTGAAAGACAAGCTGCAAGAATGAGAGTTAAGTATTTAAAAGCAGTGCTTAGACAAGATGTATCATATTTTGATTTGCATGTCACAAGCAAGTCTGAAGTCCTCACCTGTGTCTCTAGTGATAGTCTCGTTATTCAAGAAGTTCTTAGTGAAAAGGTTCCAAATTTTTTGATGAATTTCTTTAGGTTCGTTGGAAGCTACATAGCAGCTTTTGTTTTGTTGTGGAAATTGGCCATTGTGGCGTTTCCCTTTGTGGTGCTTCTTGTGATCCCTGGTTTAATTTATGGGAAGACTATGATGGGGTTGGCTAGAAGGATCAGAGAAGAGAGTAATAAGGCTGGTACAATAGCAGAACAAGCAATATTTTCCATCAGAACCGTTTATTCCTTTGTAGGGGAAAGCAAGACCATAAATGCTTTCTCTGAAGCTCTACAAGGCTCTGTTAAGTTAGGGCTGAGACAAGGCTTAGCTAAAGGATTAGCCATTGGAAGCAATGGTGTTGTGTTTGCTATATGGTCTTTCATGGTCTATTATGGAAGCAGATTGGTCATGTACCATGGTGCTAAAGGAGGGACTGTGTTTGCGGTTGGATCAGTCATATGTATTGGTGGATCGGCCTTAGGTGCTAGTTTATCTGAGTTGAAGTACATCACAGAAGCATGTGTTGCTGGGGAACGCATAATGGAAATGATAAAAAGAGTTCCCAATATTGATTCTGAAAATATGGCTGGGGTGATTCTAGAGAAAGTCTCAGGGGAAGTGGAATTTGATCATGTTAAATTTATCTACCCATCAAGGCCCGACAACGTTATTTTGAATGATTTTTGCCTGAGGATTCCGGCAGGGAAAACATTGGCTTTAGTTGGAGGGAGTGGCTCAGGAAAATCCACTGTGATATCACTTTTGCAAAGATTTTATGACCCAATTGAGGGAGAGATACGTCTTGATGGTGTGGCTTATCATAGGTTGCAACTCAAGTGGCTAAGGTCACAGATGGGTTTGGTTAGCCAAGAGCCTACTCTTTTTGCAACCAGCATTAAGAAGAATATACTTTTTGGAAGAGAAGATGCTAATGAGGAAGAGATTGTTGAGGCTGCCAAAGCTGCCAATGCTCATGATTTCATTTCACAGTTGCCACAAGGATACAATACCCAGGTTGGAGAGAAAGGAGTTCAAATATCAGGGGGGCAAAAACAGAGGATTGCTATTGCACGAGCAATAATAAAAAAACCCCAAATCCTTCTTCTAGATGAGGCAACAAGTGCACTAGACTCCGAATCAGAACGCAAAGTGCAAGAAGCTCTTGATAAAATTGTTCTGGATCGAACTACCATTGTCGTAGCTCATCGCTTATCCACAATAAGAGATGCACATGTCATTATTGTTTTGGAGAATGGGAAGATCATAGAGATGGGTTCTCATGGTGAGCTCACACAAATTGACAATGGGCTTTACACATCTCTTGTTCATTTCCAACAAATTGAGAAATCCAAAAATGACACACTCTTTCACCCTTCTATTTTAAATGAAGACATGCAAAACACAAGTAGTGATATTGTAATTAGTCATTCTATTTCTACAAACGCAATGGCTCAATTTTCTCTTGTTGATGAAGATAATGCCAAAATAGCCAAAGATGATCAAAAGCTCTCACCTCCTTCATTTTGGAAATTGTTAGCATTGAATCTGCCTGAGTGGAAACAAGCATGTTTGGGGTGTTTGAATGCAACGTTATTTGGTGCAATTGAGCCATTGTATGCATTTGCAATGGGCTCCATGATATCAATTTTTTTCCTCACAGATCATGATGAGATTAAAAAGAAAGTTGTTATCTATTGTTTATTTTTTATGGGATTGGCTGTGTTTTCATTGGTTGTTAATATCATCCAACATTATAGTTTTGCTTACATGGGAGAATACTTGAGCAAAAGGGTGAAAGAAAGCATGCTTTCCAAGATACTCAATTTTGAAGTTGCATGGTTCGATCAGGACAAAAATTCCACCGGTGTGATTTGCTCTAGATTAACTAAAGAAGCCAATATAGTTAGGTCTTTAGTGGGAGATAGAATGGCTCTGTTGGTACAAACTATTTCAGCAGTGGTGATAGCATGCACAATGGGCCTAATCATTGCATGGAGATTTGCCATTATATTGATTGTTGTTCAACCTATTGGCATTGCAAGTTTCTACACAAGACTTGTACTCCTCAAGGGTATGTCTAAAAAGGCTATCAAAGCCCAAGATGAAACTAGCAAAATAGCTATTGAAGCTATTTCTAACCTTCGAACCATCACTGCCTTTTCCTCACAAGACCAGGTCATAAAAATGTTAAAAAAGGCTCAAGAAGGCCCAATCCGTGAAAATATTAGACAATCATGGTTTGCAGGCATTGGGCTTGGATGTGCTCGAAGCCTTACAACTTTCACTCGGGCTTTAGAATATTGGCATGAAGGACGGTTATGA 2754 0.3972 DQNHIGVDTKKKNGSIGSIFMHADGLDWFLMVLGVFGAMGDGFSSPVMMYFIGRIVNNIGDVSKITPSTFMHNVNKVLSLSLSLPLFFLSGYCWTRTSERQAARMRVKYLKAVLRQDVSYFDLHVTSKSEVLTCVSSDSLVIQEVLSEKVPNFLMNFFRFVGSYIAAFVLLWKLAIVAFPFVVLLVIPGLIYGKTMMGLARRIREESNKAGTIAEQAIFSIRTVYSFVGESKTINAFSEALQGSVKLGLRQGLAKGLAIGSNGVVFAIWSFMVYYGSRLVMYHGAKGGTVFAVGSVICIGGSALGASLSELKYITEACVAGERIMEMIKRVPNIDSENMAGVILEKVSGEVEFDHVKFIYPSRPDNVILNDFCLRIPAGKTLALVGGSGSGKSTVISLLQRFYDPIEGEIRLDGVAYHRLQLKWLRSQMGLVSQEPTLFATSIKKNILFGREDANEEEIVEAAKAANAHDFISQLPQGYNTQVGEKGVQISGGQKQRIAIARAIIKKPQILLLDEATSALDSESERKVQEALDKIVLDRTTIVVAHRLSTIRDAHVIIVLENGKIIEMGSHGELTQIDNGLYTSLVHFQQIEKSKNDTLFHPSILNEDMQNTSSDIVISHSISTNAMAQFSLVDEDNAKIAKDDQKLSPPSFWKLLALNLPEWKQACLGCLNATLFGAIEPLYAFAMGSMISIFFLTDHDEIKKKVVIYCLFFMGLAVFSLVVNIIQHYSFAYMGEYLSKRVKESMLSKILNFEVAWFDQDKNSTGVICSRLTKEANIVRSLVGDRMALLVQTISAVVIACTMGLIIAWRFAIILIVVQPIGIASFYTRLVLLKGMSKKAIKAQDETSKIAIEAISNLRTITAFSSQDQVIKMLKKAQEGPIRENIRQSWFAGIGLGCARSLTTFTRALEYWHEGRL 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00144 917 SUPERFAMILY ABC transporter transmembrane region 27 332 IPR036640 GO:0005524|GO:0016021
Gma19g00144 917 ProSitePatterns ABC transporters family signature. 490 504 IPR017871 GO:0005524
Gma19g00144 917 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 17 917 IPR039421 -
Gma19g00144 917 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 909 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma19g00144 917 Pfam ABC transporter transmembrane region 32 292 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma19g00144 917 Pfam ABC transporter transmembrane region 668 912 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma19g00144 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 590 IPR027417 -
Gma19g00144 917 Gene3D ABC transporter type 1, transmembrane domain 87 913 IPR036640 GO:0005524|GO:0016021
Gma19g00144 917 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 912 - -
Gma19g00144 917 CDD ABC_MTABC3_MDL1_MDL2 351 589 - -
Gma19g00144 917 Gene3D - 349 621 IPR027417 -
Gma19g00144 917 Pfam ABC transporter 369 518 IPR003439 GO:0005524
Gma19g00144 917 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 351 587 IPR003439 GO:0005524
Gma19g00144 917 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 316 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma19g00144 917 SMART AAA_5 378 564 IPR003593 -
Gma19g00144 917 CDD ABC_6TM_Pgp_ABCB1_D1_like 31 324 - -
Gma19g00144 917 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 17 917 - -
Gma19g00144 917 SUPERFAMILY ABC transporter transmembrane region 653 912 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00144 Gma-Chr19 1667441 1714358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00144 668 917 Calmodulin-binding Proteins AT2G36910 17.063 2.62e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00144 K05658 - gmx:100808241 1618.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00144 19 1667441 1714358 Gma19g00144 19 1667441 1714358 ECH