Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00110 ATGTCGCAGCAAttagggttcgcgatcgagctatacctagaccctgcgttggagaatcaggttctgaaagcatggaacgttcttgcgagaagacaaatcagcacgcacctgatagaaatggagtctcggccacacataaccctattctcggcgccatttctagaaccttcgaagctcgaatctctcctgaaaggcttcgcatcgaagcacgatcctctccctctcaccttctcttccctcgccactttccccaacgaccccgacaacctcctcttcctcgccCCAACCCCTTCCCTCTCACTCCTCCACCTTCAGTCACAGCTCTGTGACGCTATCAGAAAAGAAGGCCTCGAAATCGGTGACGATTACGCTTTCAATTCCTGGATCCCTTATTGCTCCGTTGCACACCATGTCCCCAAAAACAGAATGCCTGAGGCTTTCTCCCTCTTGAGGGAACTCAAGCTTCCGGTTTCCGGTTACGCCATGGATATCGCTCTCGTTCAGTTCTCTCCGGTTCGGGAAATCTTCTCGTTTGTGCTCGGCAACAACAGTTGA 555 0.2631 MSQQLGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLKGFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNNS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00110 184 Pfam 2'-5' RNA ligase superfamily 43 167 - -
Gma19g00110 184 Gene3D Cyclic phosphodiesterase 7 182 - -
Gma19g00110 184 PANTHER - 2 183 - -
Gma19g00110 184 SUPERFAMILY LigT-like 7 139 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00110 Gma-Chr19 1141556 1143928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00110 6 183 Calmodulin-binding Proteins AT5G40190 64.607 8.27e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00110 - - gmx:100802388 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00110 19 1141556 1143928 Gma19g00110 19 1141556 1143928 ECH