Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00106 ATGATGGATAGAAGGCACTGTTACAAGGATTTGCTGCCATTGGTGGTGCTTGTTGCCAATGAATGCAACAACACAGGCTTGTTCACTCTCTTCAAAGCAGCCACACTGCAAGGGATGAGTAACTATGTCTTTGTCACCTATGCCTATTCTGTTGCCTTTCTTGTACTACTTCCTGTCACTTTTTTCTACAGAAGATCAAGAGTGGTTCCTCCACTCACTTTTTCCATCCTATCCAAAATTGCCCTTCTTGGAGTGATAGGGTGTTCATCTCAGATCTTGGGGTATGCTGGCATCAGGTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCTTTCACCTTCGTGCTTGCAGTCATTTGCAGGATGGAAAAGATAGCTGTAAAACGTAGAACAACCCAAGCTAAGATATTGGGCAGCATAATATCAGTATTAGGTGCATTTGTTGTGACTTTCTACAAAGGCCAATCGGTCATCATAGCTGATAATTCCCCTTCCATTCAACTTCCACAATCAAATGGCATTCTTACTTCAGTGGATAGAAATTGGGTCATTGGTGGCCTTCTGCTCACAGCTTGCAATATACTACTTACTGTATGGTTCGTTTACCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTATCTATGGTCTTCTTTTACAACTTGTGTGCAGCCATTGTAGCATCAATTGTAGGCTTATTAGGGGAGAAAAATTCAAGTGCATGGAAAATAAGACCAGATATATCACTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCCTGAGTAGTGCAATATATGCTTGGGGAATACACTTAAAAGGGCCTGTGTATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCGGTTGCCATGGGTGTTATGTTCCTTGGTGATTCTCTATATGTTGGAAGTATAATTGGAGCCACAATAATATCAATTGGGTTTTATACTGTTATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGGGGAGGAGGAAAATGTTGGTAGCCAGGAATCATCAATTACTGAGAACGTTCCTCTTTTGCAAAGCTATATAACTGTAAATTCTACGAAGAAAATAGATGGAAGTGTATAG 1122 0.4109 MMDRRHCYKDLLPLVVLVANECNNTGLFTLFKAATLQGMSNYVFVTYAYSVAFLVLLPVTFFYRRSRVVPPLTFSILSKIALLGVIGCSSQILGYAGIRYSSPTLSSAISNLTPAFTFVLAVICRMEKIAVKRRTTQAKILGSIISVLGAFVVTFYKGQSVIIADNSPSIQLPQSNGILTSVDRNWVIGGLLLTACNILLTVWFVYQVEILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDSLYVGSIIGATIISIGFYTVMWGKATEQKEEEGEEENVGSQESSITENVPLLQSYITVNSTKKIDGSV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00106 373 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Gma19g00106 373 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020|GO:0016021
Gma19g00106 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 330 - -
Gma19g00106 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Gma19g00106 373 PANTHER WAT1-RELATED PROTEIN 6 360 IPR030184 GO:0016021|GO:0022857
Gma19g00106 373 PANTHER WAT1-RELATED PROTEIN 6 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00106 Gma-Chr19 1100618 1104802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00106 2 360 Nodulin-like Gene Family AT3G28050 50.407 4.41e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00106 - - gmx:100791805 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00106 19 1100618 1104802 Gma19g00106 19 1100618 1104802 ECH
Gma02g00286 02 2987304 2991039 Gma19g00106 19 1100618 1104802 ECH