Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00097 ATGGAGTCGGCAACTTCTGAGGCTGTGGATACAGGTTGCAGCCTCAAAATTCAACTTTCACCTTTATTGAATGATTCAAGAAGTGAAGAGGGAGACTGGGATGAAATCCTTCATAACAAGTGCTGTGGAGCAGCATTCGATGCTTACATCTATGCACTCGGTTGGCGGGCAAATCAAACTGGAAAGATTTACTTAGATTCTACTGAGCAAAGAAATTGTCTGTCTAGAATGAAAAGTTTGAATGATGATGTTTTTGGTTGTGGAATTGAGAACCTAACAAGTGGTGCTGGTGGGTGTTCTGACTTGTTGGTTTCTGATGTTAGGAGTAGATTAGGAAATGAGCTTAGAAGTTTAGATGAAAACTGTCAACAGTCATGTTCTTTGTGCCTGAAGACCTGGAATACAATAGGAGGGACAGATTCCAGAAAGACCAATGCCAAAACTGAAAAAATTGAAGCTGATCTCTGTAGAATTGCAGTTCTTGTGACATTGATAAGCAGCAAAATTGAAAATGTGATGTATGTCAAAACAGTTCTGAGATGCCTTGGAGCACAACATATTTATTCAGGTATATGGATTGTGACTGGAGCAATCATAGGGGTTATATTGATAATACTTATCACTGCATGCTTCATGTCTCGTAGATACTTCAGATCAGCCCCACCAAAAAAAGAAGTAACATTTGGAGACATGTTAAGGAAAACTGCCTGTCCTAGAGTTCCTATTAAGGAAGTGTATGCGGCCACAAACCATCTGAATGAAATGAATATCATTGGGAAAGGAACTTCAGGTAAGGTCTATAAGGGTACAATGACAAATAATCTGAATGTTGCAATAAAGCACATAATCAATGATGATGGAAATGTGAACACTTTTGTCAGAGAAATTACAAGCTTATCTCATGTCAGACACCCTAATATTGTTGCTTTGTTGAGTTACTGTGTTGAGGGAGATGAACGTTTTCTGGTTTATGAACTATGTCCCAATGGGAGCCTTTCAGAATGGCTATTTGGCAAGAACAAGGTGCTATCCTGGATACAAAGGCTAGAAATCGCAATTGATTGTGCTAGAGGTCTTTGGTTCTTACATACTTACCAAGGAGGATGCATTGTTCACCGTGATATCAAGCCAACAAATATTCTTCTGGGGTCCAAATTTGAGGCAAAGCTATCAGACTTTGGACTGTCTAAAGTTATTGAGGTGGGCGAAACGTATGTAAGCTCTGAAGTGAGAGGAACATTTGGATATGTTGACCCCGAGTACCAAAGTAACCACCATGTGAATTCATCAGGTGACGTTTACAGCTTTGGAATGGTACTTCTACAAATCCTCTCGGGAAAGAAGGTTATAAATTTGAAACTGAAGAAACCAATGCCACTGAACAAAGTGGCAAAAGCATTCACCAGGGATGGGAGGATAACAGGATTTGCTGACCCTAAACTTCAAGGAGAGTACTCTGAAGAAGCATTTGATTTTGCACTTAAGTTAGCACTATCATGTACAGCCCTCAACCAACAACGTCCATCCATGGAGCAGGTTGTCAAAAGACTAGAAGAGGCTCTGTTCATTTCAAAAGGGAGGAAGGCTTCTACTCCAGAAACTCCAGCTGACAATATTTCTAATCCATAA 1629 0.4002 MESATSEAVDTGCSLKIQLSPLLNDSRSEEGDWDEILHNKCCGAAFDAYIYALGWRANQTGKIYLDSTEQRNCLSRMKSLNDDVFGCGIENLTSGAGGCSDLLVSDVRSRLGNELRSLDENCQQSCSLCLKTWNTIGGTDSRKTNAKTEKIEADLCRIAVLVTLISSKIENVMYVKTVLRCLGAQHIYSGIWIVTGAIIGVILIILITACFMSRRYFRSAPPKKEVTFGDMLRKTACPRVPIKEVYAATNHLNEMNIIGKGTSGKVYKGTMTNNLNVAIKHIINDDGNVNTFVREITSLSHVRHPNIVALLSYCVEGDERFLVYELCPNGSLSEWLFGKNKVLSWIQRLEIAIDCARGLWFLHTYQGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGETYVSSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMPLNKVAKAFTRDGRITGFADPKLQGEYSEEAFDFALKLALSCTALNQQRPSMEQVVKRLEEALFISKGRKASTPETPADNISNP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00097 542 Gene3D Phosphorylase Kinase; domain 1 218 326 - -
Gma19g00097 542 ProSiteProfiles Protein kinase domain profile. 252 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00097 542 SUPERFAMILY Protein kinase-like (PK-like) 234 518 IPR011009 -
Gma19g00097 542 Coils Coil 500 520 - -
Gma19g00097 542 SMART serkin_6 252 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00097 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Gma19g00097 542 PANTHER - 12 530 - -
Gma19g00097 542 Pfam SPARK 12 148 IPR043891 -
Gma19g00097 542 Pfam Protein kinase domain 254 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00097 542 ProSitePatterns Protein kinases ATP-binding region signature. 258 280 IPR017441 GO:0005524
Gma19g00097 542 Gene3D Transferase(Phosphotransferase) domain 1 327 531 - -
Gma19g00097 542 PANTHER OS01G0750732 PROTEIN 12 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00097 Gma-Chr19 1005675 1008416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00097 244 533 Receptor kinase-like Gene Family AT2G28970 41.356 1.02e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Gma19g00097 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00097 - - gmx:102663798 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00097 19 1005675 1008416 Gma19g00097 19 1005675 1008416 ECH