Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00092 ATGATCATGGAGCTATCGGATTCCACCGGGGCCGACCGCAACCCCAACGCGCCGCCGCCGCACAGCAACCAAAACCAAGACGCGCGTTCCGGTCTCGGAATCGACCTGAACGAGATCCCCTCGCCTTCCTCTTCGTTTCCAGAAACCCTACCGGACTCCGTCGCCGTCGACGTCGTCCGCGCATACCATGACAACCCAGCTCCGCCGCCGGGTGGCCCCGCCGCCCTCCCTCGCGGTGGCTCCTCTCCCTGCGCCGCCTGCGCCAAGCCTTCCCCCGCCGCCGTGAACCACCACCAACTCGTCGTGTGCGACGGCTGCGAGCGTGACTTCCACCTCTCCTGCGCCGGAATTCGCGGCGGAGGCCGACAGGCGGCGAACCTCGACGAGTGGGTCTGCGGCGAGTGCGTCGCCGCCGGAGTTAAGAGCAAGCGGTGGCCGTTGGGAGTGAAACAACTTCTCGATATCAATGCTCCGCCGCCAAGCGACGGCGGCGACGAGGAGGTTCAGGATTCGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGCGACGAATTCAAACTTCAACAATGGGAATGCTATTGGCTTCCAAAAGGCATCTGGAGTTGTGACGCATGCTGTTAGAGTGGGTTTTGAGGATATAACTCAATTTACTAGAAGCTTTGAGGAGGCTCTTAGAGATTTTGTATCTGAACGGCGTGGTGTACTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAGTGAGCAACTCTGAACTGTATGCAGTTTACTGTGCACCAGATGGAAAGATATTTGATTCTGTGTATGAAGTGGCTTATTATTTGGGGCTAGCGCCTCTCCCTTCTTTAGGTGGGCCTCTATCCAAAAAAAGAAAGTTAACAAGAACTACAGCAGCTAACGGTTCTATGGAAAAGCGGGGAACCTTGATGAATAGTAATTGTAAGGATCCTCCTTCTGATGGTTTAAATGTGGAATGTGCTAGTGCTAGGGGGAATATCCCAAAACTCTCTGAAATTGGAGGAAAAGAGGATTGCCACTCCCACCCTCAACAATCTGCTGATGGACTTCCTCTACAGTTCAAGGATTTCTTTGTTCTTTCTTTGGGGAAAGTTGATGCGAGACCTTCATATTATGATGCTAATCTTATCTGTCCTGTAGGTTATAAATCTTGTTGGCATGACAAGATCACTGGCTCTCTTTTTACATGTGAAGTTTTGCAGGGTGGTGATTCTGGACCTATATTTAGGATCCGAAGGTGTTCCTGTTCAGAATTTCCTGTTCCAGTTGGGTCAACCATACTCTCAATGTCAAAACTTTGTCAAGTTGTGAGTCAAACCAATGAAGAAGGTGAGGGAAAAACTAATGGTAGTATGGATTTAGATGATGATGAAAGTCTCCAAATGATGCTTTTAGACCCTTGTGTGCCAATGGAAAATGATATCCTTAGTTGCTTTCCAAGCTGCTCAACTGAGGAACATGATACTCATACATCAGATGTATTACACCCTGTTGCTAGTTCAGTTCAAGATAATGCTAGAAATTCATTAGCTGATAACTTAGGGTTTAATGATGGAATTGGTGAAATTTTGGTGGAAGAGCGGTCGTCATTCTCTGCATGGACAGTTATTTCTCAAAAGCTGGTTAACGCTTGCAAGGATATCTGCAAACAGAAAGGAAATCTCAATTTCTATTGTAACCATGTTGATAAATGGGATTTAAGGAATGGAAAAAGTGATACATACTTTACTTCGATGGATAAATTTTGTGGTTCTCTTGGTGCAGTTGGAATCCCAAATGTAATTTATGCAGACAATGATGTGGAAGGTATCTACGAGGCACTGGGAAAATGGTTGGAGCAGGATAGATTTGGATTAGATGCTGAATTTGTGCAAGAAGTATTGGAACAACTTCCTGGTGTCCAAGACTCTTTGCAGTATGAACTTTTAAATACTAGAAATAATAGCTCATCATTGCCAACAGTAGAAAATGGTTTCTTAGTGGTTGAATGGAGAGATGGATCAAAATATCAGGAAGAAACAGTTCAAGCTTTATATGGGAGGTCCAAGAAGGTGACTGAGAAAAGCATTAAGGAAGGTCGTCATCCACCACTTGGGAAGCCAGTATGCTCTAGGGCTCCTGGTGAGCTCATTGGTGACATTTTTCAGTCTTGGGAGCTTTTAAAGCGATTTCATGAAATTCTGGACCTGAAAGAGCCATTGACATTAGATGAACTTGAGAAAGAACTCATTAACCCTTGGTTTGATGAATTAGATTTTCTTGAGAAATCTGAGAGGGACATGGATGAAAGTCAAGTTTTAATTTCCCAAGGAGCTGATGGTAATTGTAGACCATTGTTGTCCCCAAGATGTGAAGCTGATCCATCAGGTTCCATAGAAAGTTCTCATGCGTTTATTCAAGTGGAAACAGAAGCAATGAAAGAGGCAGCTCAAGTTAAGTTTGCATCTTTCACATATGCCAGATGCTTTGGTGTAGCTTTGACCAAGGCTCATAATTCATTGCTAAGAGTGTTAATAGGTGAATTGCTGTCAAAGGTGGCTTCCCTGGTAGATCCAAATTCTGAACCTGGAGAATCACGAACAAGACGGGGAAGAAGGAAAGATATGGATAGTGCAGTTCCTGCTAAACGAACCAAGCTCAATATGCTTCCTATTAATGAATTGACTTGGCCAGAATTAGCTCGTAGGTATATGTTGGCTTTTTTGTCAATGGATGGTAACCTTGAGTCTGTGGAAATTACTGCTCGCGAAAGTGGTAAAGTATTTCGTTGCTTACGTGGTGATGGTGGTTTGCTGTGTGGTTCTCTTACTGGTGTGGCTGGGATGGAAGCAGATGCACAGCTGCTTGCAGAGGCTACGAAGAAAATTTTTGGTTCTTTAAGTAGAGAAAGTGATGCACTAACCATGGAAGAAGAAGAGTCTAATGCAAAGGGTGTTTCTGAAATTTTTTTGGCAAATGATGGTAATGTTCCTGAATGGGCACAGATGCTAGAACCTGTCAGAAAGCTACCAACAAATGTAGGCACCCGAATCAGAAAGTGTGTCTATGAGGCTCTGGAAAAGAATCCACCAGAATGGGCAAGGAAAACGCTGGAGCATTCAATCAGTAAGGAAGTGTACAAGGGCAATGCTTCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGGCTAAAGTTGGTGGTGAAGGATTTCAATCTAATCCCAATAAAGGACAGAAAAAGAAAATTGTTATATCAATTTCTGACATTATCATGAAACAATGTCGCATAGTATTACGTCGTGCCGCTGCTGCAGATGATTCAAAGGTTTTTTGCAATTTGCTGGGAAGAAAATTAACAAATTCTTCAGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCCATGGTAGCCCGTCCTCTTGACTTTCGCACTATTGACCTAAGATTAGCTACCGGAGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCACGAGCTGTGGAACAATGTCCGTGTTGCTTTTGGGGATCAACCTGATTTAATTGAACTGGCTGAAAAATTATCCCTAAACTTTGAATCATTATATAATGAGGAGGTTGTCTCGTATGTCCAAAAATTTGTGGAGTATGCTAAAGTGGAATGCTTAAGTGCAGAAATGAGAAAGGAAGTTGTTGATTTTATTGAGTCAACAAATGAGATTCCGAAGGCCCCTTGGGATGAGGGAGTATGTAAAGTATGTGGCATTGATAGGGATGATGATAGTGTTCTACTATGTGATACTTGTGATGCTGAGTATCATACATATTGCTTGAATCCTCCACTTGCAAGGATCCCTGAGGGAAACTGGTACTGTCCCTCTTGTGTTGATGGTAAGCGTGCAACTCAAGATGTCACAGAACGTACAAAGATTATTGGTAAACGTCAAAGTAAAAAGTTTCAGGGAGAAGTCAATTCTCTATACTTGGAATCTCTAACTCATTTGTCATCTGTAATTGAGGAAAAAGAATACTGGGAGTACAGCGTGGGCGAGAGAACTTTCCTTCTCAAGTTTTTATGTGATGAGTTGCTTAACTCTTCCCTGATTCGCCAGCACCTTGAGCAATGTGCAGAGTTGTCTGCTGAGTTACATCAGAAATTGCGTGCACACTCTGCAGAGTGGAAAAGCCTGAAAACTAGAGAGGATATTTTATCCACAAAAGCTGCAAAAATGGATACATTCTCAGTAAATACTGCTGGAGAAGTTGGTCTTAAGGAAGGGTTTACTGGTAAATGCCCGGTCCAGCCACATACTGCAGTTGACAATCCTAGTAATTTTGGGGTATTTGTTGATAGTCTGCCTTCAGAAGAGGTTACCAAAGAGAGGTATAGGTTTGATAGTGTTGATAAAAGCATATCTGTGACAAATTCAGATTCTGATAGCCAAAATATGAATTCCATAGATGTAGAGGGACAATTTAGAAATGTCTCTGCTGCTGTGGAGTCTCAATGTACTGACAAATCCCCCAAATCTTTTCCATCACCAAATCATATGTCTCAAGAAATAAATTGTGCTGGTGGAGAAGCTCATGTCCAGGGTAACCACCAGAAATGTGAGGGAACGGACAGACCTATTCCTGTGTCTTACCAGCAAGGAGGAGTGCCTGTTGATGTTCCTCAGATTGGCTTGAATGAGTCAGAACCCTACCACCTTGAGCTCAATGCCATCAAACGTGATATTTCACTATTGCAGGACTCCATAACTAGTGTAGTATCACAGCTGCTGAAGCTCTCTGTTCGCCGGGAATTTTTGGGTATTGATTCCATTGGTCAATTGTACTGGGCTTCGGCTTTGCCTGGAGGACATTCACGTATAATTGTTGATGCAAGTGCTGCATTGCTGCATGGAAGAGGAATGCCATTTAGCAGAGACTATGCAGAGAAGTTTTCTGTTCTGCAGCATTGTGCACTATCTGACAAGGATTCCTCTTTAATGTCTCAGCCTAGTAATTCTTTGGGCAATAGGTCACCGTGGATTGCTTATGAAACTGATGCTGAAATTGAAGAGCTCTTAGGTTGGCTGGATTATAGTGACCCTAAAGAAAGAGAACTGAAAGATTCCATTATGCTGGGCCCAAAATCAAGATTCCAAGAGTTCATTAATGCACAGACTGAAGATCAGGGCGAGGACCAAGGGCATATTTCTATGCCAAGAAATAGAGAGAAAACAGTATCTAATTCTCTTGTTACAAAGGCAACTTCCTTGCTGGAAAAGAAATTTGGTCCCTTCGTTGAGTGGGATAATGTTGAAGTGTTGAAGAAGCAAAATAGAAAGGCCCGAACAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAACCCATATGGCCTTCTCGGAAACACTGCACATATTGTCACAAAACTGTTGTGAGTGATGTTGAATTTGATGGACACAATGATGGCAAGTGTATTGCAGGTCTTCCAGCTGTAGAGAAGAAAAAGGATAAAAATGGATCATCTAAAGGAAGAGGGAACTTAAAATGTGATGCCTCACATGAGAAATTCAGAGCTGATGCTGAAACAGCTGTAACCTCGGTTAGTGGGTCTTCTAAGCTTAGCTCAAGATTGATTAAATTTTCAAATGAAGAATCCACATGCCCATTTAGTTTTGAAGATATATGTTCCAAGTTTGTGACCAATGATTCCAACAAAGAACTTGTCAGAGAAATAGGTCTTATTGGTTCAGATGGTATCCCATCCTTAGTTCCTTCTGTATCTCCTTTTGTTAGTGAATATACACTCTCAGCTCAAAAGGATGAAAGAATTGTTGGTGGTGTGTCCAAAGCATCAGAAAGCCAGGTCTCTCAGGGAAACACTGATGGAGCTGGCACATGTCTTGACCGTAAATCAAGCATTTCTACTGGAAGGTTGGCTGCAAATGAAAGCAACAAATCCAACAAATCATCCTCGAGAGAACAAAGAGATGGGAAATTATCTTTTTGTAATCCTGCTTCTGGTATGGGAGCTGATGGCTACTGTGTGGTTCCTTCGCCTTCGTTGAGACCATTAGTTGGAAAAGCTTCTCATATTTTGAGGCAGTTGAAGATAAATCTACTTGATATGGATGCTGCACTTACGGCAATTGCTCTAAGACCATCAAAGGCTGAGTCAGACAGAAGACAGGCTTGGCGTACATTTGTAAAATCTGCAAAGACTATATATGAGATGATTCAGGCAACATTTACACTGGAGGATATGATTAAGACAGAGTACTTGAGGAATGACTGGTGGTACTGGTCATCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCCCTTGCCCTTCGCATATACTCCCTTGATTTAGCCATTATATATGAGAAAATGCCCAATTCAAGCTTTACTGACAGCTCTGAACCTTCTGCCATAGTGGAACCAAAACCACCGATGCATTTGGATGCAGAAAAATCCAAAGCAAGCCGGAAGTCAACCAGAAAAAGGAAGGAATCAGATTGTTGA 6528 0.4301 MIMELSDSTGADRNPNAPPPHSNQNQDARSGLGIDLNEIPSPSSSFPETLPDSVAVDVVRAYHDNPAPPPGGPAALPRGGSSPCAACAKPSPAAVNHHQLVVCDGCERDFHLSCAGIRGGGRQAANLDEWVCGECVAAGVKSKRWPLGVKQLLDINAPPPSDGGDEEVQDSRKHTLGDNSFGANPFGAPATNSNFNNGNAIGFQKASGVVTHAVRVGFEDITQFTRSFEEALRDFVSERRGVLEEGWRVEFRQSVSNSELYAVYCAPDGKIFDSVYEVAYYLGLAPLPSLGGPLSKKRKLTRTTAANGSMEKRGTLMNSNCKDPPSDGLNVECASARGNIPKLSEIGGKEDCHSHPQQSADGLPLQFKDFFVLSLGKVDARPSYYDANLICPVGYKSCWHDKITGSLFTCEVLQGGDSGPIFRIRRCSCSEFPVPVGSTILSMSKLCQVVSQTNEEGEGKTNGSMDLDDDESLQMMLLDPCVPMENDILSCFPSCSTEEHDTHTSDVLHPVASSVQDNARNSLADNLGFNDGIGEILVEERSSFSAWTVISQKLVNACKDICKQKGNLNFYCNHVDKWDLRNGKSDTYFTSMDKFCGSLGAVGIPNVIYADNDVEGIYEALGKWLEQDRFGLDAEFVQEVLEQLPGVQDSLQYELLNTRNNSSSLPTVENGFLVVEWRDGSKYQEETVQALYGRSKKVTEKSIKEGRHPPLGKPVCSRAPGELIGDIFQSWELLKRFHEILDLKEPLTLDELEKELINPWFDELDFLEKSERDMDESQVLISQGADGNCRPLLSPRCEADPSGSIESSHAFIQVETEAMKEAAQVKFASFTYARCFGVALTKAHNSLLRVLIGELLSKVASLVDPNSEPGESRTRRGRRKDMDSAVPAKRTKLNMLPINELTWPELARRYMLAFLSMDGNLESVEITARESGKVFRCLRGDGGLLCGSLTGVAGMEADAQLLAEATKKIFGSLSRESDALTMEEEESNAKGVSEIFLANDGNVPEWAQMLEPVRKLPTNVGTRIRKCVYEALEKNPPEWARKTLEHSISKEVYKGNASGPTKKAVLSVLAKVGGEGFQSNPNKGQKKKIVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLTNSSDNDDEGLLGSPAMVARPLDFRTIDLRLATGAYGGSHEAFLEDVHELWNNVRVAFGDQPDLIELAEKLSLNFESLYNEEVVSYVQKFVEYAKVECLSAEMRKEVVDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDGKRATQDVTERTKIIGKRQSKKFQGEVNSLYLESLTHLSSVIEEKEYWEYSVGERTFLLKFLCDELLNSSLIRQHLEQCAELSAELHQKLRAHSAEWKSLKTREDILSTKAAKMDTFSVNTAGEVGLKEGFTGKCPVQPHTAVDNPSNFGVFVDSLPSEEVTKERYRFDSVDKSISVTNSDSDSQNMNSIDVEGQFRNVSAAVESQCTDKSPKSFPSPNHMSQEINCAGGEAHVQGNHQKCEGTDRPIPVSYQQGGVPVDVPQIGLNESEPYHLELNAIKRDISLLQDSITSVVSQLLKLSVRREFLGIDSIGQLYWASALPGGHSRIIVDASAALLHGRGMPFSRDYAEKFSVLQHCALSDKDSSLMSQPSNSLGNRSPWIAYETDAEIEELLGWLDYSDPKERELKDSIMLGPKSRFQEFINAQTEDQGEDQGHISMPRNREKTVSNSLVTKATSLLEKKFGPFVEWDNVEVLKKQNRKARTTNDEKLYRCECLEPIWPSRKHCTYCHKTVVSDVEFDGHNDGKCIAGLPAVEKKKDKNGSSKGRGNLKCDASHEKFRADAETAVTSVSGSSKLSSRLIKFSNEESTCPFSFEDICSKFVTNDSNKELVREIGLIGSDGIPSLVPSVSPFVSEYTLSAQKDERIVGGVSKASESQVSQGNTDGAGTCLDRKSSISTGRLAANESNKSNKSSSREQRDGKLSFCNPASGMGADGYCVVPSPSLRPLVGKASHILRQLKINLLDMDAALTAIALRPSKAESDRRQAWRTFVKSAKTIYEMIQATFTLEDMIKTEYLRNDWWYWSSFSAAAKSSTLPSLALRIYSLDLAIIYEKMPNSSFTDSSEPSAIVEPKPPMHLDAEKSKASRKSTRKRKESDC 2175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00092 2175 Pfam Bromodomain 1140 1195 IPR001487 GO:0005515
Gma19g00092 2175 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 29 2174 - -
Gma19g00092 2175 CDD PHD1_Lid2p_like 1251 1296 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 9 50 - -
Gma19g00092 2175 ProSiteProfiles Zinc finger PHD-type profile. 1249 1299 IPR019787 -
Gma19g00092 2175 SUPERFAMILY FYVE/PHD zinc finger 1238 1300 IPR011011 -
Gma19g00092 2175 ProSitePatterns Zinc finger PHD-type signature. 84 135 IPR019786 -
Gma19g00092 2175 SMART PHD_3 83 136 IPR001965 -
Gma19g00092 2175 SMART PHD_3 1251 1297 IPR001965 -
Gma19g00092 2175 Pfam Methyl-CpG binding domain 235 286 IPR001739 GO:0003677
Gma19g00092 2175 SUPERFAMILY DNA-binding domain 234 286 IPR016177 GO:0003677
Gma19g00092 2175 MobiDBLite consensus disorder prediction 1947 2004 - -
Gma19g00092 2175 Pfam PHD-finger 84 136 IPR019787 -
Gma19g00092 2175 Pfam PHD-finger 1251 1297 IPR019787 -
Gma19g00092 2175 SUPERFAMILY Bromodomain 1086 1206 IPR036427 GO:0005515
Gma19g00092 2175 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1331 1375 IPR028942 -
Gma19g00092 2175 Gene3D - 363 471 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 155 180 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 1950 1988 - -
Gma19g00092 2175 ProSiteProfiles FYR domain FYRN motif profile. 362 415 IPR003888 GO:0005634
Gma19g00092 2175 MobiDBLite consensus disorder prediction 869 884 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 62 82 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 1 50 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 2135 2175 - -
Gma19g00092 2175 MobiDBLite consensus disorder prediction 863 884 - -
Gma19g00092 2175 PANTHER OS02G0192300 PROTEIN 29 2174 - -
Gma19g00092 2175 Coils Coil 1370 1390 - -
Gma19g00092 2175 SUPERFAMILY FYVE/PHD zinc finger 82 137 IPR011011 -
Gma19g00092 2175 ProSiteProfiles Bromodomain profile. 1142 1190 IPR001487 GO:0005515
Gma19g00092 2175 MobiDBLite consensus disorder prediction 2152 2175 - -
Gma19g00092 2175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 141 IPR013083 -
Gma19g00092 2175 ProSiteProfiles Zinc finger PHD-type profile. 81 138 IPR019787 -
Gma19g00092 2175 Gene3D - 1093 1215 IPR036427 GO:0005515
Gma19g00092 2175 ProSitePatterns Zinc finger PHD-type signature. 1252 1296 IPR019786 -
Gma19g00092 2175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1237 1321 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00092 Gma-Chr19 950011 963838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00092 26 2172 C2H2 Transcription Factor Family AT3G01460 44.044 0.0 1682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gma19g00092 Bromodomain 5.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00092 K22768 - gmx:100791814 4280.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00092 19 950011 963838 Gma19g00092 19 950011 963838 ECH