Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00091 ATGGAGTCTGGACGGATTTTCTTTGGTGCCTCTGCTTCAAGCGGCAACAACATGCTCTTTCTCGGCAACACTGAACTTGCTTTTCGAGGGAGATCGATTATGAGCATGGAGGAAGCCTCGAAGAGGCGACCTTTCTTCACCTCACCGGATGAACTGTATGATGAAGAGTATTATGAGAAGCAGTCGCCGGAGAAGAAGCACCGCCTCAGTTCCGAACAGGTCCATCTGTTGGAGAAGAGCTTTGAGGAAGAGAACAAATTGGAGCCTGAGAGGAAGACCCAGTTGGCTAAGAAGCTGGGATTGCAGCCCAGGCAGGTGGCTGTGTGGTTTCAGAACCGCAGGGCTCGATGGAAGACCAAGCAACTTGAAAGGGATTATGATGTTCTCAAGTCTTCATACGATACCCTACTTTCATCCTATGATTCAATTATGAAGGAGAATGAGAAACTCAAATCTGAGGTGGTATCCTTAAATGAAAAGCTTCAAGTTCAAGCTAAAGAGGTGCCTGAGGAACCATTATGTGACAAGAAAGTTGATCCAATTCCAGTAGATGAAGATATGGCTCCGATTTTCGGCACAAGGGTGGAGGACCACCTGAGTAGTGGGAGTGTTGGAAGTGCGGTGGTGGATGAGGGTAGTCCACAGGTGGTTGTTGACAGTGTTGATTCATACATTCTAGCTGACAACTATGGTGGATGTGTGGGCCCGGTCGAGAGGGTTCAGTCGGAGGAGGAGGATGGGAGTGATGATGGGAGGAGTTACTTGGATGTGTTTGTGGTATCTGAAACTGAGCACCAAAACCATGAGGAAGGAGAGACATTGGGTTGGTGGACTAATATGTATTATGTTGGATAA 855 0.476 MESGRIFFGASASSGNNMLFLGNTELAFRGRSIMSMEEASKRRPFFTSPDELYDEEYYEKQSPEKKHRLSSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSLNEKLQVQAKEVPEEPLCDKKVDPIPVDEDMAPIFGTRVEDHLSSGSVGSAVVDEGSPQVVVDSVDSYILADNYGGCVGPVERVQSEEEDGSDDGRSYLDVFVVSETEHQNHEEGETLGWWTNMYYVG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00091 284 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Gma19g00091 284 SMART HOX_1 62 124 IPR001356 GO:0003677
Gma19g00091 284 SUPERFAMILY Homeodomain-like 52 122 IPR009057 -
Gma19g00091 284 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 257 - -
Gma19g00091 284 Gene3D - 58 127 - -
Gma19g00091 284 Coils Coil 140 167 - -
Gma19g00091 284 CDD homeodomain 65 121 IPR001356 GO:0003677
Gma19g00091 284 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Gma19g00091 284 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Gma19g00091 284 Pfam Homeodomain 65 118 IPR001356 GO:0003677
Gma19g00091 284 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 257 IPR045224 GO:0003700
Gma19g00091 284 Pfam Homeobox associated leucine zipper 120 162 IPR003106 GO:0006355|GO:0043565
Gma19g00091 284 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00091 Gma-Chr19 945325 949132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00091 1 277 Homeobox Transcription Factor Family AT3G01470 56.184 2.99e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma19g00091 Homeodomain 9.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00091 K09338 - gmx:100813420 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00091 19 945325 949132 Gma19g00091 19 945325 949132 ECH