Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00088 atgaagaagagtgagagtggggggtatgtgagAGCGGATCAGATAGATCTGAAAAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGAAGAAGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAATGGGAGATTGACCCCTCTAAGCTTGTCATCAAGACTGTCATTGCTCGTGGCACTTTTGGCACTGTCCATCGTGGGATTTATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAAGGCCATCGGTCAGATGCTGAAATAGCTTCTTTGCGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGAACATCCTAATGTAACCAAGTTTATTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGattgtccacagagatgttaaaacagaaaatatgcttctggacaagacacgaaccttgaaaatagctgattttggagtagctcgtattgaggcctccaatcctcatgacatgacaggtgaaactggaacccttggttacatggctcctgagGTTCTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCAGAAGTGACATCAGCTGTTGTACGACAGAATTTGAGGCCAGAGATTCCGCGATGTTGTCCTAGCGCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCGAATCCTGACAAGAGGCCGGAGATGGATGAAGTGGTGACCATGTTGGAAGCTATTGATACTTCAAAGGGTGGAGGTATGATCCCTCATGATCAGCCTCAGGGTTGTTTATGTTTTCGCAGTTATCGAGGACCTTGA 1104 0.3759 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLEHPNVTKFIGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSALANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPHDQPQGCLCFRSYRGP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00088 367 ProSiteProfiles Protein kinase domain profile. 64 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00088 367 Coils Coil 24 44 - -
Gma19g00088 367 Gene3D Transferase(Phosphotransferase) domain 1 164 350 - -
Gma19g00088 367 PRINTS Tyrosine kinase catalytic domain signature 161 174 IPR001245 GO:0004672|GO:0006468
Gma19g00088 367 PRINTS Tyrosine kinase catalytic domain signature 199 217 IPR001245 GO:0004672|GO:0006468
Gma19g00088 367 PRINTS Tyrosine kinase catalytic domain signature 265 287 IPR001245 GO:0004672|GO:0006468
Gma19g00088 367 PRINTS Tyrosine kinase catalytic domain signature 309 331 IPR001245 GO:0004672|GO:0006468
Gma19g00088 367 SMART serkin_6 64 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00088 367 Pfam Protein tyrosine and serine/threonine kinase 65 338 IPR001245 GO:0004672|GO:0006468
Gma19g00088 367 Gene3D Phosphorylase Kinase; domain 1 52 147 - -
Gma19g00088 367 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 361 - -
Gma19g00088 367 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 361 - -
Gma19g00088 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gma19g00088 367 CDD STKc_MAP3K-like 70 338 - -
Gma19g00088 367 MobiDBLite consensus disorder prediction 35 54 - -
Gma19g00088 367 PIRSF ILK 18 347 - -
Gma19g00088 367 SUPERFAMILY Protein kinase-like (PK-like) 48 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00088 Gma-Chr19 884467 888493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00088 11 367 MAP Kinase Kinase Kinase AT3G22750 69.529 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma19g00088 PK_Tyr_Ser-Thr 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00088 - - gmx:100806635 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00088 19 884467 888493 Gma19g00088 19 884467 888493 ECH