Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00077 atgATGCTTCAATTATTCCAACACACACAAAAGCTTGGTACTACTCTGAACATGGTAGTCCAGGTCATCGCTGCATCCATTAATCCCGTTGATTACAAGAGGATGCACGGCGAGTTCAAGGACACTGACCCTCATCTGCCTATTGTGCCGGGTTATGATGTTGCTGGCATAGTAGTGAAAGTGGGAGGAGAAGTAAAAAAATTTAAGGTTGGAGATGAAGTATATGGTGATATCAACGAGCAAGGCTTGTCGAACCTTAAGATTCATGGCACTTTGTCAGAGTATACTATTGCAGAAGAGAGACTATTGGCTCATAAACCATCCAATCTAAGCTTCATTGAAGCTGCTAGCATTCCTTTAGCACTTGAGACTGCTAACGAAGGTTTTGAACATGCTCACTTCTCTGCTGGCAAATCTATCCTTGTTTTGGGAGGAGCTGGTGGAGTTGGAAACTATGTTATTCAGCTAGCTAAACAAGTTTATAAGGCGTCTAAGATAGCAGCAACTGCTAGCACCGGCAAACTTGAACTTTTAAGGGAGTTGGGCGTTGACTTGCCTATTGATTACACAAAGGAGAACTTTGAAGACCTTCCAGAAAAATACGATCTAGTGTATGATGTAGTAGGGCAAGGTGATAGAGCATTTAAGGCCGTTAAGGAAGATGGGAAAGTTGTGACAATAGTACCACCTGGACATCCACCAGCTATGTTTTTCGTGCTCACCTCAAAGGGATCTATCTTAGAGAATTTAAGACCTTACTTTGAGAGTGTTCATTTAATTTTCTCAAGACAGCCGTTGAAGTTTGACTGA 810 0.4185 MMLQLFQHTQKLGTTLNMVVQVIAASINPVDYKRMHGEFKDTDPHLPIVPGYDVAGIVVKVGGEVKKFKVGDEVYGDINEQGLSNLKIHGTLSEYTIAEERLLAHKPSNLSFIEAASIPLALETANEGFEHAHFSAGKSILVLGGAGGVGNYVIQLAKQVYKASKIAATASTGKLELLRELGVDLPIDYTKENFEDLPEKYDLVYDVVGQGDRAFKAVKEDGKVVTIVPPGHPPAMFFVLTSKGSILENLRPYFESVHLIFSRQPLKFD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00077 269 Gene3D - 18 258 - -
Gma19g00077 269 SUPERFAMILY GroES-like 19 142 IPR011032 -
Gma19g00077 269 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 137 158 IPR002364 GO:0008270|GO:0016491
Gma19g00077 269 CDD MDR_like_2 19 256 - -
Gma19g00077 269 Pfam Zinc-binding dehydrogenase 148 228 IPR013149 -
Gma19g00077 269 Gene3D - 129 243 - -
Gma19g00077 269 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 18 258 IPR044626 GO:0016628
Gma19g00077 269 Pfam Alcohol dehydrogenase GroES-like domain 18 77 IPR013154 -
Gma19g00077 269 SMART PKS_ER_names_mod 1 247 IPR020843 GO:0016491
Gma19g00077 269 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 18 258 - -
Gma19g00077 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 110 236 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00077 Gma-Chr19 805232 811342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00077 43 74 Monolignol Biosynthesis Gene Families AT1G72680 59.375 7.79e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00077 K18980 - gmx:100788619 448.743