Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00060 ATGTCTGGGTTGGAGGAATTGAGAAAAAAGCTTGCACCTTTATTTGATGCCGAGAAGGGTTTCTCATCAAGTTCAACATTGGACCCTTGTGATTCTTACACATTCTCGGATGGTGGGACTGTTAACTTGTTGAGTAGATCATATGGGGTTTACAATATCAACGAGCTTGGGTTGCAGAAGTGCACATCTAGGTCCGTGGATGAAACTGATCACAGTGAGAAAACGTATAAGTGTTGTTCCCATGAGATGAGAATATTTGGAGCAATAGGGAGTGGTGCCAGTAGTGTTGTGCAGAGAGCTATACATATACCAACACATAGGATTCTGGCATTAAAGAAGATCAACATCTTCGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTATGCGAAGCACCATGTTATGAGGGTCTTGTAGAATTTCACGGGGCATTTTACACCCCAGACTCTGGACAGATAAGCATAGCTTTGGAGTACATGGATGGAGGATCGCTTGCAGATATTTTGCGAATGCATAGAAGAATACCTGAACCTATTCTATCTTCCATGTTTCAGAAGCTCCTGCATGGTCTAAGCTATCTCCATGGAGTCAGACATCTAGTTCACAGAGACATAAAGCCTGCCAATCTACTAGTAAATCTTAAGGGGGAGCCAAAGATTACTGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACATACATGTCGCCTGAGAGGATTCGAAATGAAAACTATTCTTATCCAGCTGATATTTGGAGCCTTGGtcttgctctttttgagtgtgggacaggagaattcccgtatactgcaaatgaaggtcctgtcaatcttatgttgcagATCCTGGATGATCCATCACCATCACCATTGAAAAACAAGTTTTCACCTGAATTCTGCTCCTTTGTTGATGCTTGCTTACAAAAGGATCCAGATACCAGGCCAACAGCAGAGCAGCTGCTTTCGCACCCCTTTATCACAAAGTATGAGGATGCCAAGGTCGATTTGGCAGGATTTGTTCGAAGCGTTTTTGATCCTACACAAAGAATGAAGGATTTAGCAGATATGTTGACAATACATTATTACTTGCTATTTGATGGACCTGATGATTTGTGGCAACATACAAGGAATTTATATAGCGAAAGCTCAATTTTCAGTTTCTCTGGGAAACAACATCGTGGTCCAAGTAATATCTTTACATCTCTATCAAGTATTAGAACTACATTGGTTGGTGACTGGCCTCCTGAAAAGTTGGTGCATGTTGTTGAGAGGCTCCAATGCCGCACTCACGGTGAAGATGGAGTTGCAATTAGGGTATCAGGATCCTTCATAATTGGAAATCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGCTTGCCAAACTTCAAGGATCTTGGAATTGACATTCCTAGCAAAAGAATGGCCTCAACAAACAAGCTCATTTCGGCCATGAGACCCCGGAATTTGACCTGGTCCTCAGCTTAA 1530 0.4013 MSGLEELRKKLAPLFDAEKGFSSSSTLDPCDSYTFSDGGTVNLLSRSYGVYNINELGLQKCTSRSVDETDHSEKTYKCCSHEMRIFGAIGSGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHRRIPEPILSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTANEGPVNLMLQILDDPSPSPLKNKFSPEFCSFVDACLQKDPDTRPTAEQLLSHPFITKYEDAKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDLWQHTRNLYSESSIFSFSGKQHRGPSNIFTSLSSIRTTLVGDWPPEKLVHVVERLQCRTHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDIPSKRMASTNKLISAMRPRNLTWSSA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00060 509 Gene3D - 358 465 - -
Gma19g00060 509 CDD PKc_MAPKK_plant_like 84 343 - -
Gma19g00060 509 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00060 509 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00060 509 PANTHER - 2 491 - -
Gma19g00060 509 Gene3D Transferase(Phosphotransferase) domain 1 159 354 - -
Gma19g00060 509 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Gma19g00060 509 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 456 IPR018222 -
Gma19g00060 509 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00060 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Gma19g00060 509 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 491 - -
Gma19g00060 509 Gene3D Phosphorylase Kinase; domain 1 76 158 - -
Gma19g00060 509 SUPERFAMILY Protein kinase-like (PK-like) 85 402 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00060 Gma-Chr19 592791 597471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00060 30 490 MAP Kinase Kinase Gene Family AT5G40440 80.043 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gma19g00060 Pkinase 6.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00060 K20607 - gmx:100820176 997.653