Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00057 ATGTCTCCTTATTCTCTCTCTTTGTTAGCCTCTGTCTCCCCCAAAATGCACACCCTTCTTTCTTTCTCCTCATCACACTCTCCACATCTTCCAAACCACAACATAACCAAATCCAATAATAAACTCTCTCATTCCATCAATGGACTTTCATCATGCCCTTCTTCTCCTTTGCTCCCCAGTGCCACAAAATCTTCTCCCTTTCTCATTTCCACTTCAAAAATTGCATCTTTCAGGGTCCTTGCTGCTTCCTCTATACCTGATGCTAGAAGTGATGAACCAGCCAAAACTAGTGATTTCTTAAAAACTCTTCAGCTTGGGGCCATGTTTGCAACTTGGTACCTTTTGAACATCTACTACAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAATTACAGCATTTCAATTTGGCTTTGCATCGTTGGTTATTAATCTAGTCTGGACTTTGAATCTCCATCCCAGACCAAGCATCAGTGGTTCACAGTTTGCAGCAATCCTTCCACTGGCTGTGGCTCACACAATGGGAAACCTCTTGACCAACATTAGTCTTGGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTCTTCACTGTAGTTCTTTCTGCCCTTTTACTGGGTGAGATGCCTACTTTCTGGGTGGTTTCTTCCCTTGTACCAGTAGTAGGTGGAGTGGCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGATTCACTACTGCTATGGCATCTAACGTTACTAATCAATCGCGGAACGTTTTGAGCAAAAAACTGATGACTAATGAAGAGGAAACTTTGGACAATATCAATCTCTACTCAGTTATAACTATCATTTCCTTTCTGTTGTTGGTCCCATGTGCTATTCTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACTTGCAATCTGCTGCAAGTCAAGGGCTGAATGTCAGAGAGCTATGTGTCAGATCAGTTCTTGCTGCTTTTTGCTTCCATGCATACCAGCAGGTATCATATATGATATTACAGATGGTGTCACCTGTGACCCACTCTGTTGGAAACTGTGTGAAGCGTGTGGTTGTCATTGTTTCTTCAGTTATATTCTTCCAAATTCCTGTCTCACCCGTTAACACACTTGGAACTGGGCTTGCACTTGTTGGAGTTTTCTTGTACTCAAGGGCAAAGAGGATCAAGTCAGTCCAAAAGACAAATTGA 1227 0.4214 MSPYSLSLLASVSPKMHTLLSFSSSHSPHLPNHNITKSNNKLSHSINGLSSCPSSPLLPSATKSSPFLISTSKIASFRVLAASSIPDARSDEPAKTSDFLKTLQLGAMFATWYLLNIYYNIYNKQVLKVYPFPATITAFQFGFASLVINLVWTLNLHPRPSISGSQFAAILPLAVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSALLLGEMPTFWVVSSLVPVVGGVALASMTEVSFNWIGFTTAMASNVTNQSRNVLSKKLMTNEEETLDNINLYSVITIISFLLLVPCAILVEGVKFSPSYLQSAASQGLNVRELCVRSVLAAFCFHAYQQVSYMILQMVSPVTHSVGNCVKRVVVIVSSVIFFQIPVSPVNTLGTGLALVGVFLYSRAKRIKSVQKTN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00057 408 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 30 402 - -
Gma19g00057 408 PANTHER SOLUTE CARRIER FAMILY 35 30 402 - -
Gma19g00057 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 240 - -
Gma19g00057 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 400 - -
Gma19g00057 408 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 403 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gma19g00057 408 Pfam Triose-phosphate Transporter family 103 396 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00057 Gma-Chr19 533964 539766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00057 77 407 Antiporters AT5G33320 64.048 1.71e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00057 K15283 - gmx:100819280 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00057 19 533964 539766 Gma19g00057 19 533964 539766 ECH