Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00055 ATGGCTTCCAAATATCATTATAACAAATACAACAATCCAtcatatgttgttgttatcttcatagtgttgtgtttcttcTCCCAGTCAGCACTATCTGATCCAAGAATCTCAGAAGTGGGACACTACTGCAGCACACAGAAATCACAAACAAGTGGTGACTACTTACCCATATTCACCAAAGAAATGGAAAAACTTCTAGAACTTGTGACAAAACAAAACTGGGGGACTCACTCTGAGGGCATGTCATCAACAACAACCACTCCTATCTATGGCTTGGCACAATGCTTCCAAGACCTTTCCAGCATTGATTGCCTTCAATGCTTTGCAGCCAGCCGGACGAAGCTCCCTCGCTGCCTCCCTTCGGTTTCGGCTCGAATTTACCTTGATGGTTGCTTCCTTCGCTATGACAATTACAGTTTCTACACTGAAAACTATGACCCTTTGAGGGACACAGTGAATTGCACCTCAGAGTATGGTTCTGAGGGTGAGAGGTTGGTGTTTGCTGAGAGTGTTGGCAAAGTGGTTGAGAGTGTGGTGAGGGTGGCTGTGAATAATAATGAGGGAAGAGGCTTTTTTGCAGTTGGAGAAGGTGGGGGAGTTTATGCATTGGCACAGTGCTGGAAAACTGTTGGGGTAAAAGGGTGTAGTGATTGCTTGAGGAAAGCTGAAAATGAGGTCAAAGGATGTTTGCCTAAGAGGGAAGGGAGGGCCTTGAATACTGGGTGCTATTTGAGATACTCAACTGTTAAGTTCTACAATCAAGGAGGTCAAGATGGTCAAGGAGATGATTCTTCCAGAAAACGAGTCATTATAGCAGCAGGGTCAGTCTTGGCTGCAGCCGTTGTAGTTCTCACTCTTGCAGTCTCTTATGTGGCCTTCACCAAAAAGAGAAGAAAAAACAATTTTATTGAGGTTCCTCCTTCCTTGAAGAATTCTAGCTTGAATTACAAATATGAAACTCTAGAGAAGGCGACGGATTATTTCAGCTCTTCAAGAAAGATAGGTCAAGGAGGATCTGGTTCTGTATACAAAGGGACTCTGCCAAATGGGAATGATGTTGCTGTTAAGAGATTGGTCTTCAATAATAGGCAATGGGTGGATGATTTCTTCaatgaagtgaatttgattagtggaatgcaacacaagaaccttgtcaaactattgggttgcagcattgaaggccctgagagcctcattgtgtatgagtacctacctaacaagagcttagatcaattcatttttgAAAAGGACATAACAAGGATTCTAAAATggaagcagcggtttgaaataattcttggaactgcagaagggcttgcatatcttcatggaggctctgaaataagaatcatccatagagacataaaaagtagcaatgttcttctggatgagaatctcagccctaagattgcagattttggtcttgcccggtgttttggtactgataaaacgcatctaagcactggcattgctggaacactaggttacatggctcccgagtatctgattcaaggacaacttacagataaagctgatgtctatagttttggagtacttgttctcgagattgcaagtggcaggaagaataatgtcttccgtGAGGATTCTGGTTCCCTTTTGCAAACAGTTTGGAAACTTTACCAATCAAACAGATTGGGTGAAGCTGTTGATCCTGGCTTGGGAGAAGACTTTCCTGCAAGAGAAGCATCAAGGGTGTTTCAAATTGGATTACTATGCACACAAGCTTCTGCTTCCCTGAGGCCATTCATGGTTCAAGTTGCTAGCATGTTAAGTAATTCAAATTTGGATGTCCCTATACCAAAACAACCCCCATTTTTGAACTCTAGATTTCTAGATCAAACATCTCCATTAGGTTTTAGCATAGACAGCTCCTCATCAAACACATTTAAGAAGATTGGTGTGTCCTACAGCCCCTCTGAGTTCTCTAGCACATGCAGCTTAATTAGGCCATCAAGAAGTGAAGAAACAATTATGGAAGCTTGA 2001 0.3213 MASKYHYNKYNNPSYVVVIFIVLCFFSQSALSDPRISEVGHYCSTQKSQTSGDYLPIFTKEMEKLLELVTKQNWGTHSEGMSSTTTTPIYGLAQCFQDLSSIDCLQCFAASRTKLPRCLPSVSARIYLDGCFLRYDNYSFYTENYDPLRDTVNCTSEYGSEGERLVFAESVGKVVESVVRVAVNNNEGRGFFAVGEGGGVYALAQCWKTVGVKGCSDCLRKAENEVKGCLPKREGRALNTGCYLRYSTVKFYNQGGQDGQGDDSSRKRVIIAAGSVLAAAVVVLTLAVSYVAFTKKRRKNNFIEVPPSLKNSSLNYKYETLEKATDYFSSSRKIGQGGSGSVYKGTLPNGNDVAVKRLVFNNRQWVDDFFNEVNLISGMQHKNLVKLLGCSIEGPESLIVYEYLPNKSLDQFIFEKDITRILKWKQRFEIILGTAEGLAYLHGGSEIRIIHRDIKSSNVLLDENLSPKIADFGLARCFGTDKTHLSTGIAGTLGYMAPEYLIQGQLTDKADVYSFGVLVLEIASGRKNNVFREDSGSLLQTVWKLYQSNRLGEAVDPGLGEDFPAREASRVFQIGLLCTQASASLRPFMVQVASMLSNSNLDVPIPKQPPFLNSRFLDQTSPLGFSIDSSSSNTFKKIGVSYSPSEFSSTCSLIRPSRSEETIMEA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00055 666 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 24 658 - -
Gma19g00055 666 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00055 666 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Gma19g00055 666 Gene3D - 152 251 IPR038408 -
Gma19g00055 666 Gene3D - 36 140 IPR038408 -
Gma19g00055 666 Gene3D Transferase(Phosphotransferase) domain 1 404 603 - -
Gma19g00055 666 SUPERFAMILY Protein kinase-like (PK-like) 313 618 IPR011009 -
Gma19g00055 666 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Gma19g00055 666 Pfam Salt stress response/antifungal 161 248 IPR002902 -
Gma19g00055 666 Pfam Salt stress response/antifungal 55 138 IPR002902 -
Gma19g00055 666 ProSiteProfiles Gnk2-homologous domain profile. 149 251 IPR002902 -
Gma19g00055 666 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 24 658 - -
Gma19g00055 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Gma19g00055 666 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Gma19g00055 666 SMART serkin_6 328 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00055 666 CDD STKc_IRAK 334 596 - -
Gma19g00055 666 Pfam Protein tyrosine and serine/threonine kinase 331 595 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00055 Gma-Chr19 510409 514967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00055 15 493 Receptor kinase-like Gene Family AT5G40380 54.268 1.40e-175 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma19g00055 PK_Tyr_Ser-Thr 5.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00055 - - gmx:100817509 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00055 19 510409 514967 Gma19g00055 19 510409 514967 ECH